RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where bioproject = "PRJNA812715", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 22 ✖

tax_kingdom 1

  • Metazoa · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA812715 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2087529 2087529 PRJNA812715_P_NODE_106762_length_248_cov_2.605714_g104961_i0 PRJNA812715 106762 248 2.605714 6.46217072 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 259 1.23e-64   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g104961 i0 86.192 4.92741935483871 239 33 96 0 6 244 5154 5392 Stenostomum sthenum mitochondrion, complete genome blastn 1222 259 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
4643132 4643132 PRJNA812715_P_NODE_85444_length_276_cov_1.137931_g83643_i0 PRJNA812715 85444 276 1.137931 3.14068956 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.025   NTclustered gi|690658596|emb|LN207720.1| 99802 g83643 i0 96.774 0.22463768115942 31 1 11 0 235 265 1271 1301 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0174958 blastn 62 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
8465513 8465513 PRJNA812715_P_NODE_18447_length_808_cov_13.580952_g16886_i0 PRJNA812715 18447 808 13.580952 109.73409216 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 1288 0   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g16886 i0 95.432 26.3341584158416 810 33 100 4 1 808 8964 8157 Stenostomum sthenum mitochondrion, complete genome blastn 21278 1288 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
11017028 11017028 PRJNA812715_P_NODE_38249_length_461_cov_3.644330_g36459_i0 PRJNA812715 38249 461 3.64433 16.8003613 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 514 4.75e-141   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g36459 i0 86.9 78.353579175705 458 60 99 0 3 460 457 914 Stenostomum sthenum mitochondrion, complete genome blastn 36121 514 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
13565261 13565261 PRJNA812715_P_NODE_100431_length_252_cov_2.513966_g98630_i0 PRJNA812715 100431 252 2.513966 6.33519432 Brachylaima thompsoni 138588 Platyhelminthes Platyhelminthes 466 6.89e-127   NTclustered gi|31711564|gb|AY222085.1| 138588 g98630 i0 100 86.515873015873 252 0 100 0 1 252 657 908 Brachylaima thompsoni 18S ribosomal RNA gene, partial sequence blastn 21802 466 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Diplostomida Brachylaimidae Brachylaima Brachylaima thompsoni
16116294 16116294 PRJNA812715_P_NODE_56693_length_351_cov_2.115108_g54894_i0 PRJNA812715 56693 351 2.115108 7.42402908 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 58.4 7.13e-4   NTclustered gi|687277514|emb|LK436380.1| 57078 g54894 i0 86.207 0.925925925925926 58 3 15 4 247 300 215 271 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0041755 blastn 325 58.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
22490121 22490121 PRJNA812715_P_NODE_42218_length_430_cov_1.725490_g40423_i0 PRJNA812715 42218 430 1.72549 7.419607 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 154 2.03e-41   NR VDM34723.1 6205 g40423 i0 53.7 24.2232558139535 147 64 99.8 1 2 430 46 192 VDM34723.1 unnamed protein product [Hydatigera taeniaeformis] diamond 10416 154 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Hydatigera Hydatigera taeniaeformis
23765537 23765537 PRJNA812715_P_NODE_34279_length_501_cov_1.794393_g32497_i0 PRJNA812715 34279 501 1.794393 8.98990893 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 124 8.26e-32   NR AQN67664.1 52061 g32497 i0 90.9 0.395209580838323 66 6 39.5 0 199 2 165 230 AQN67664.1 cytochrome oxidase subunit 3 [Stenostomum leucops] diamond 198 124 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
25039681 25039681 PRJNA812715_P_NODE_41660_length_434_cov_2.060942_g39865_i0 PRJNA812715 41660 434 2.060942 8.94448828 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 92 3.21e-19   NR YP_009391134.1 1611831 g39865 i0 70.4 0.490783410138249 71 21 49.1 0 433 221 40 110 YP_009391134.1 NADH dehydrogenase subunit 1 [Stenostomum sthenum] diamond 213 92 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
27054393 27054393 PRJNA812715_P_NODE_115902_length_244_cov_0.900585_g114101_i0 PRJNA812715 115902 244 0.900585 2.1974274 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 110 3.18e-29   NR AQN67663.1 52061 g114101 i0 86.3 0.897540983606557 73 10 89.8 0 26 244 2 74 AQN67663.1 NADH dehydrogenase subunit 3 [Stenostomum leucops] diamond 219 110 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
28096639 28096639 PRJNA812715_P_NODE_94525_length_261_cov_2.117021_g92724_i0 PRJNA812715 94525 261 2.117021 5.52542481 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 63.9 1.47e-9   NR PAA67170.1 282301 g92724 i0 65.4 3.27586206896552 52 17 59.8 1 105 260 312 362 PAA67170.1 hypothetical protein BOX15_Mlig028343g3 [Macrostomum lignano] diamond 855 63.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28105238 28105238 PRJNA812715_P_NODE_60265_length_338_cov_1.162264_g58466_i0 PRJNA812715 60265 338 1.162264 3.92845232 Platyhelminthes 6157 Platyhelminthes Platyhelminthes 56.2 1.31e-6   NR XP_009164229.1 6198 g58466 i0 63.2 1.01183431952663 38 14 33.7 0 117 4 2 39 XP_009164229.1 hypothetical protein T265_01855 [Opisthorchis viverrini] diamond 342 56.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
28357803 28357803 PRJNA812715_P_NODE_63246_length_327_cov_1.212598_g61447_i0 PRJNA812715 63246 327 1.212598 3.96519546 root 1 Root_unresolved Root_unresolved 44.7 0.0213   NR KAA0189579.1 27845 g61447 i0 59.4 0.871559633027523 32 13 29.4 0 1 96 612 643 KAA0189579.1 Ankyrin 23:unc44 [Fasciolopsis buskii] diamond 285 45.1 0.991130820399113 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciolopsis Fasciolopsis buskii
28958082 28958082 PRJNA812715_P_NODE_115388_length_244_cov_0.900585_g113587_i0 PRJNA812715 115388 244 0.900585 2.1974274 Metazoa 33208 Platyhelminthes Platyhelminthes 70.9 4.79e-12   NR XP_009162298.1 6198 g113587 i0 46.4 6.17213114754098 84 41 98.4 2 244 5 511 594 XP_009162298.1 hypothetical protein T265_00289 [Opisthorchis viverrini] diamond 1506 71.2 0.995786516853933 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
29012573 29012573 PRJNA812715_P_NODE_57808_length_347_cov_1.186131_g56009_i0 PRJNA812715 57808 347 1.186131 4.11587457 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 62 1.93e-8   NR PAA73431.1 282301 g56009 i0 35.7 0.994236311239193 115 74 99.4 0 347 3 170 284 PAA73431.1 hypothetical protein BOX15_Mlig020812g1 [Macrostomum lignano] diamond 345 62 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
29147688 29147688 PRJNA812715_P_NODE_48289_length_391_cov_28.273585_g46492_i0 PRJNA812715 48289 391 28.273585 110.54971735 Cyclophyllidea 6201 Platyhelminthes Platyhelminthes 52.4 6.27e-5   NR CDS37392.1 6211 g46492 i0 41.3 1.71099744245524 75 32 54.5 4 312 100 206 272 CDS37392.1 calbindin 32 [Echinococcus multilocularis] diamond 669 52.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus multilocularis
29422516 29422516 PRJNA812715_P_NODE_92729_length_264_cov_1.612565_g90928_i0 PRJNA812715 92729 264 1.612565 4.2571716 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 93.2 6.619999999999999e-23   NR PAA52392.1 282301 g90928 i0 84 3.54545454545455 50 8 56.8 0 234 85 1 50 PAA52392.1 hypothetical protein BOX15_Mlig007628g1 [Macrostomum lignano] diamond 936 93.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
30085799 30085799 PRJNA812715_P_NODE_106332_length_249_cov_0.875000_g104531_i0 PRJNA812715 106332 249 0.875 2.17875 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 102 4.0799999999999996e-23   NR PAA64936.1 282301 g104531 i0 53.7 1.96385542168675 82 38 98.8 0 247 2 2124 2205 PAA64936.1 hypothetical protein BOX15_Mlig007406g1, partial [Macrostomum lignano] diamond 489 102 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
30370750 30370750 PRJNA812715_P_NODE_77692_length_288_cov_1.432558_g75892_i0 PRJNA812715 77692 288 1.432558 4.12576704 Schistosoma margrebowiei 48269 Platyhelminthes Platyhelminthes 47 0.00183   NR VDP17315.1 48269 g75892 i0 38.9 5.25 72 40 75 2 233 18 174 241 VDP17315.1 unnamed protein product [Schistosoma margrebowiei] diamond 1512 47 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma margrebowiei
30622848 30622848 PRJNA812715_P_NODE_100173_length_253_cov_1.283333_g98372_i0 PRJNA812715 100173 253 1.283333 3.24683249 Opisthorchis felineus 147828 Platyhelminthes Platyhelminthes 57.8 2.15e-7   NR TGZ60883.1 147828 g98372 i0 32.1 3.84189723320158 81 54 94.9 1 13 252 120 200 TGZ60883.1 hypothetical protein CRM22_008284 [Opisthorchis felineus] diamond 972 57.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis felineus
30907622 30907622 PRJNA812715_P_NODE_89234_length_270_cov_1.172589_g87433_i0 PRJNA812715 89234 270 1.172589 3.1659903 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 51.6 3.58e-5   NR PAA86061.1 282301 g87433 i0 43.9 1.26666666666667 57 27 57.8 1 107 262 272 328 PAA86061.1 hypothetical protein BOX15_Mlig034042g1, partial [Macrostomum lignano] diamond 342 51.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
31485391 31485391 PRJNA812715_P_NODE_18656_length_801_cov_2.067308_g17093_i0 PRJNA812715 18656 801 2.067308 16.55913708 Echinococcus 6209 Platyhelminthes Platyhelminthes 53.5 4.12e-4   NR XP_024350927.1 6210 g17093 i0 37.9 0.973782771535581 87 47 30.3 3 553 795 329 414 XP_024350927.1 Villin-2 [Echinococcus granulosus] diamond 780 53.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;