RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA812715", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 3 ✖

bioproject 1

  • PRJNA812715 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26959222 26959222 PRJNA812715_P_NODE_73202_length_298_cov_1.026667_g71402_i0 PRJNA812715 73202 298 1.026667 3.05946766 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 70.5 1.12e-11   NR MDP3723945.1 2035772 g71402 i0 39.8 0.986577181208054 98 56 95.6 1 6 290 24 121 MDP3723945.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 294 70.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27906870 27906870 PRJNA812715_P_NODE_103625_length_250_cov_0.870056_g101824_i0 PRJNA812715 103625 250 0.870056 2.17514 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 86.7 2.32e-20   NR MFA6600790.1 2035772 g101824 i0 61.3 0.744 62 24 74.4 0 236 51 4 65 MFA6600790.1 cold shock domain-containing protein [Candidatus Omnitrophota bacterium] diamond 186 86.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32457322 32457322 PRJNA812715_P_NODE_78139_length_287_cov_2.158879_g76339_i0 PRJNA812715 78139 287 2.158879 6.19598273 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 75.5 2.03e-13   NR NQU74025.1 2035772 g76339 i0 48.6 0.773519163763066 74 38 77.4 0 286 65 961 1034 NQU74025.1 methyltransferase domain-containing protein [Candidatus Omnitrophota bacterium] diamond 222 75.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;