RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA812715", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA812715 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5052934 5052934 PRJNA812715_P_NODE_26844_length_603_cov_1.741509_g25105_i0 PRJNA812715 26844 603 1.741509 10.50129927 Rubrivirga 1434037 Bacteria Bacteria 682 0   NTclustered gi|2890853429|gb|CP177355.1| 3391575 g25105 i0 87.15 398.524046434494 607 70 99 8 4 603 806945 806340 Rubrivirga sp. IMCC43871 chromosome, complete genome blastn 240310 682 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC43871
11428721 11428721 PRJNA812715_P_NODE_32869_length_517_cov_1.970721_g31092_i0 PRJNA812715 32869 517 1.970721 10.18862757 Rhodothermales 1853224 Bacteria Bacteria 536 1.15e-147   NTclustered gi|1167574847|gb|CP020382.1| 1779382 g31092 i0 85.687 203.25918762089 517 64 99 10 7 517 2906793 2906281 Rhodothermaceae bacterium RA chromosome, complete genome blastn 105085 536 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium RA

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;