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contig_metadata

24 rows where bioproject = "PRJNA812715", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 24 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 24 ✖

bioproject 1

  • PRJNA812715 · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
811685 811685 PRJNA812715_P_NODE_101141_length_251_cov_2.230337_g99340_i0 PRJNA812715 101141 251 2.230337 5.59814587 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 250 7.52e-62   NTclustered gi|2874253789|emb|OY969773.1| 412054 g99340 i0 84.921 2.8605577689243 252 32 100 5 4 251 422327 422078 MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 blastn 718 250 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
1225247 1225247 PRJNA812715_P_NODE_85961_length_275_cov_1.262376_g84160_i0 PRJNA812715 85961 275 1.262376 3.471534 Bacteria 2 Bacteria Bacteria 82.8 4.34e-16   NR HTJ21287.1 2026741 g84160 i0 53.4 4.86545454545455 88 41 96 0 3 266 440 527 HTJ21287.1 murein biosynthesis integral membrane protein MurJ [Gemmatimonadaceae bacterium] diamond 1338 82.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
2087536 2087536 PRJNA812715_P_NODE_106962_length_248_cov_1.760000_g105161_i0 PRJNA812715 106962 248 1.76 4.3648 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 320 5.57e-83   NTclustered gi|2874253789|emb|OY969773.1| 412054 g105161 i0 89.96 122.665322580645 249 24 100 1 1 248 423710 423462 MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 blastn 30421 320 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
2090193 2090193 PRJNA812715_P_NODE_80942_length_283_cov_1.119048_g79142_i0 PRJNA812715 80942 283 1.119048 3.16690584 Gemmatirosa sp. 2510638 Bacteria Bacteria 114 2.9800000000000003e-27   NR HZF68918.1 2510638 g79142 i0 68.8 3.68904593639576 93 29 98.6 0 3 281 586 678 HZF68918.1 PAS domain S-box protein [Gemmatirosa sp.] diamond 1044 114 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatirosa Gemmatirosa sp.
3364754 3364754 PRJNA812715_P_NODE_59843_length_339_cov_1.932331_g58044_i0 PRJNA812715 59843 339 1.932331 6.55060209 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 346 1.31e-90   NTclustered gi|2874253978|emb|OY970303.1| 412054 g58044 i0 84.123 87.3215339233038 359 35 100 6 1 339 1903256 1902900 MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 blastn 29602 346 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
7191979 7191979 PRJNA812715_P_NODE_56066_length_354_cov_1.295374_g54267_i0 PRJNA812715 56066 354 1.295374 4.58562396 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 484 2.7899999999999993e-132   NTclustered gi|2874253728|emb|OY969570.1| 412054 g54267 i0 91.714 240.375706214689 350 27 99 2 3 351 172106 172454 MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 blastn 85093 484 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
12290924 12290924 PRJNA812715_P_NODE_100730_length_252_cov_1.670391_g98929_i0 PRJNA812715 100730 252 1.670391 4.20938532 uncultured Gemmatimonadaceae bacterium 246130 Bacteria Bacteria 172 1.68e-38   NTclustered gi|2874253995|emb|OY970320.1| 246130 g98929 i0 80.508 1.73412698412698 236 36 92 9 14 244 321891 322121 MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 blastn 437 172 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   uncultured Gemmatimonadaceae bacterium
12291414 12291414 PRJNA812715_P_NODE_119890_length_242_cov_0.911243_g118089_i0 PRJNA812715 119890 242 0.911243 2.20520806 Gemmatirosa kalamazoonensis 861299 Bacteria Bacteria 346 8.930000000000001e-91   NTclustered gi|575456455|gb|CP007128.1| 861299 g118089 i0 92.531 100.140495867769 241 18 99 0 2 242 3205531 3205771 Gemmatirosa kalamazoonesis strain KBS708, complete genome blastn 24234 346 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatirosa Gemmatirosa kalamazoonensis
14840033 14840033 PRJNA812715_P_NODE_109572_length_247_cov_0.885057_g107771_i0 PRJNA812715 109572 247 0.885057 2.18609079 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 440 4.079999999999999e-119   NTclustered gi|2874253789|emb|OY969773.1| 412054 g107771 i0 98.785 167.947368421053 247 3 100 0 1 247 421683 421929 MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 blastn 41483 440 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
18665549 18665549 PRJNA812715_P_NODE_66755_length_315_cov_1.909091_g64955_i0 PRJNA812715 66755 315 1.909091 6.01363665 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 333 9.4e-87   NTclustered gi|2874253755|emb|OY969695.1| 412054 g64955 i0 85.802 95.4380952380952 324 34 100 12 1 315 318827 318507 MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 blastn 30063 333 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
20351316 20351316 PRJNA812715_P_NODE_42896_length_425_cov_1.985795_g41101_i0 PRJNA812715 42896 425 1.985795 8.43962875 Gemmatirosa 1706036 Bacteria Bacteria 497 4.3799999999999996e-136   NTclustered gi|2874253789|emb|OY969773.1| 412054 g41101 i0 87.907 104.270588235294 430 43 100 9 1 425 420938 421363 MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 blastn 44315 501 0.992015968063872 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
23765883 23765883 PRJNA812715_P_NODE_44519_length_414_cov_1.865103_g42723_i0 PRJNA812715 44519 414 1.865103 7.72152642 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 542 1.94e-149   NTclustered gi|2874253978|emb|OY970303.1| 412054 g42723 i0 90.557 226.239130434783 413 33 99 6 1 412 1903249 1903656 MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 blastn 93663 542 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
26864806 26864806 PRJNA812715_P_NODE_98061_length_256_cov_1.683060_g96260_i0 PRJNA812715 98061 256 1.68306 4.3086336 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 40.4 0.036   NR MBU10968.1 2026742 g96260 i0 34.6 0.609375 52 33 60.9 1 27 182 11 61 MBU10968.1 hypothetical protein [Gemmatimonadota bacterium] diamond 156 40.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
26968080 26968080 PRJNA812715_P_NODE_114802_length_244_cov_1.631579_g113001_i0 PRJNA812715 114802 244 1.631579 3.98105276 Longimicrobium 1804994 Bacteria Bacteria 63.2 2.38e-9   NR HEX9936034.1 2029185 g113001 i0 71.1 2.91393442622951 45 13 55.3 0 110 244 4 48 HEX9936034.1 MFS transporter [Longimicrobium sp.] diamond 711 63.5 0.995275590551181 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
28570143 28570143 PRJNA812715_P_NODE_116287_length_243_cov_2.888235_g114486_i0 PRJNA812715 116287 243 2.888235 7.01841105 Longimicrobiales bacterium 2910168 Bacteria Bacteria 63.9 1.16e-9   NR HSJ25270.1 2910168 g114486 i0 75 0.888888888888889 36 9 44.4 0 134 241 1 36 HSJ25270.1 glycosyltransferase [Longimicrobiales bacterium] diamond 216 63.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
28854192 28854192 PRJNA812715_P_NODE_103768_length_250_cov_0.870056_g101967_i0 PRJNA812715 103768 250 0.870056 2.17514 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 80.1 2.87e-15   NR MDP9349913.1 2026742 g101967 i0 47.6 1.968 82 35 98.4 1 250 5 229 302 MDP9349913.1 prolyl oligopeptidase family serine peptidase [Gemmatimonadota bacterium] diamond 492 80.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29043974 29043974 PRJNA812715_P_NODE_105328_length_249_cov_1.312500_g103527_i0 PRJNA812715 105328 249 1.3125 3.268125 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 76.3 6.07e-14   NR MBK8005775.1 2026742 g103527 i0 57.4 3.27710843373494 68 29 81.9 0 234 31 193 260 MBK8005775.1 S8 family peptidase [Gemmatimonadota bacterium] diamond 816 76.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29201847 29201847 PRJNA812715_P_NODE_79729_length_285_cov_1.113208_g77929_i0 PRJNA812715 79729 285 1.113208 3.1726428 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 45.4 0.00657   NR HKG95476.1 2026741 g77929 i0 44.4 0.473684210526316 45 25 47.4 0 283 149 267 311 HKG95476.1 hypothetical protein [Gemmatimonadaceae bacterium] diamond 135 45.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
29864758 29864758 PRJNA812715_P_NODE_69011_length_309_cov_3.211864_g67211_i0 PRJNA812715 69011 309 3.211864 9.92465976 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 96.3 3.129999999999999e-23   NR MCC6769715.1 2026741 g67211 i0 46.9 1.85436893203884 98 52 95.1 0 2 295 20 117 MCC6769715.1 helix-turn-helix domain-containing protein [Gemmatimonadaceae bacterium] diamond 573 96.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30022933 30022933 PRJNA812715_P_NODE_86631_length_274_cov_1.184080_g84830_i0 PRJNA812715 86631 274 1.18408 3.2443792 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 74.7 2.11e-14   NR MBV6522904.1 2026741 g84830 i0 58.3 0.656934306569343 60 25 65.7 0 2 181 97 156 MBV6522904.1 hypothetical protein [Gemmatimonadaceae bacterium] diamond 180 74.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30654490 30654490 PRJNA812715_P_NODE_101513_length_251_cov_1.337079_g99712_i0 PRJNA812715 101513 251 1.337079 3.35606829 Longimicrobium sp. 2029185 Bacteria Bacteria 57 3.46e-7   NR HEU4558844.1 2029185 g99712 i0 100 0.645418326693227 27 0 32.3 0 249 169 298 324 HEU4558844.1 M48 family metallopeptidase [Longimicrobium sp.] diamond 162 57 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
30844333 30844333 PRJNA812715_P_NODE_92634_length_264_cov_1.952880_g90833_i0 PRJNA812715 92634 264 1.95288 5.1556032 Roseisolibacter sp. H3M3-2 3031323 Bacteria Bacteria 135 2e-38   NR MDF1505490.1 3031323 g90833 i0 69.3 1 88 27 100 0 264 1 24 111 MDF1505490.1 hypothetical protein [Roseisolibacter sp. H3M3-2] diamond 264 135 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Roseisolibacter Roseisolibacter sp. H3M3-2
32646206 32646206 PRJNA812715_P_NODE_110500_length_247_cov_0.885057_g108699_i0 PRJNA812715 110500 247 0.885057 2.18609079 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 103 5.9899999999999996e-24   NR HKP49127.1 2448054 g108699 i0 88.5 1.26315789473684 52 6 63.2 0 157 2 186 237 HKP49127.1 hypothetical protein [Gemmatimonadales bacterium] diamond 312 103 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
32835437 32835437 PRJNA812715_P_NODE_93460_length_263_cov_1.552632_g91659_i0 PRJNA812715 93460 263 1.552632 4.08342216 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 99.8 4.64e-23   NR MBX6331758.1 2026741 g91659 i0 53.2 0.901140684410646 79 34 86.7 1 32 259 1 79 MBX6331758.1 tyrosinase family protein [Gemmatimonadaceae bacterium] diamond 237 99.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;