RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA812715", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA812715 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26927737 26927737 PRJNA812715_P_NODE_115822_length_244_cov_0.900585_g114021_i0 PRJNA812715 115822 244 0.900585 2.1974274 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 94.7 6.98e-22   NR HSH18512.1 2973664 g114021 i0 48.8 0.983606557377049 80 41 98.4 0 3 242 97 176 HSH18512.1 methyltransferase domain-containing protein [Candidatus Saccharimonadales bacterium] diamond 240 94.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27695211 27695211 PRJNA812715_P_NODE_95164_length_260_cov_2.187166_g93363_i0 PRJNA812715 95164 260 2.187166 5.6866316 Bacteria 2 Bacteria Bacteria 101 2.95e-23   NR OYX44053.1 1970479 g93363 i0 59.8 3.98076923076923 87 34 99.2 1 260 3 81 167 OYX44053.1 MAG: hypothetical protein B7Y94_00530 [Candidatus Saccharibacteria bacterium 32-49-12] diamond 1035 101 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-12
28475555 28475555 PRJNA812715_P_NODE_85666_length_275_cov_1.930693_g83865_i0 PRJNA812715 85666 275 1.930693 5.30940575 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 44.7 0.00132   NR HVQ44541.1 2890869 g83865 i0 91.7 0.785454545454545 24 2 26.2 0 73 2 1 24 HVQ44541.1 IS5/IS1182 family transposase [Candidatus Saccharimonadia bacterium] diamond 216 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;