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contig_metadata

20 rows where bioproject = "PRJNA812001" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 20 ✖

bioproject 1

  • PRJNA812001 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3361782 3361782 PRJNA812001_P_NODE_6463_length_609_cov_5.061567_g6219_i0 PRJNA812001 6463 609 5.061567 30.82494303 Natronomonas moolapensis 416273 Archaea Archaea 656 0   NTclustered gi|452081962|emb|HF582854.1| 268739 g6219 i0 87.5 81.2676518883415 568 71 93 0 19 586 566269 565702 Natronomonas moolapensis 8.8.11 complete genome blastn 49492 656 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas moolapensis
4638797 4638797 PRJNA812001_P_NODE_136024_length_236_cov_2.153374_g135778_i0 PRJNA812001 136024 236 2.153374 5.08196264 Salinirarus marinus 3068310 Archaea Archaea 350 6.700000000000001e-92   NTclustered gi|2563036161|gb|CP132293.1| 3068310 g135778 i0 98.974 95.0381355932203 195 2 100 0 1 195 71627 71821 Haloferacaceae archaeon XH8 plasmid unnamed, complete sequence blastn 22429 350 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinirarus Salinirarus marinus
4639329 4639329 PRJNA812001_P_NODE_5844_length_641_cov_11.957746_g5606_i0 PRJNA812001 5844 641 11.957746 76.64915186 Halorussus vallis 2953749 Archaea Archaea 56.5 0.005   NTclustered gi|2263966384|gb|CP100000.1| 2953749 g5606 i0 100 0.046801872074883 30 0 5 0 286 315 568345 568316 Halorussus vallis strain XZYJT10 chromosome, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus vallis
5913763 5913763 PRJNA812001_P_NODE_137085_length_226_cov_3.000000_g136839_i0 PRJNA812001 137085 226 3 6.78 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 54.7 1.57e-7   NR MCC5994631.1 3121606 g136839 i0 77.4 0.411504424778761 31 7 41.2 0 134 226 3 33 MCC5994631.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 93 54.7 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
12289524 12289524 PRJNA812001_P_NODE_11410_length_468_cov_1.703797_g11164_i0 PRJNA812001 11410 468 1.703797 7.97376996 Halobacteriales 2235 Archaea Archaea 133 1.47e-34   NR MEF8936725.1 1954478 g11164 i0 50.4 1.70512820512821 133 63 83.3 1 30 419 197 329 MEF8936725.1 zinc ribbon domain-containing protein [Halovenus sp.] diamond 798 133 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halovenus Halovenus sp.
12290068 12290068 PRJNA812001_P_NODE_49510_length_290_cov_1.400922_g49264_i0 PRJNA812001 49510 290 1.400922 4.0626738 Promethearchaeum syntrophicum 2594042 Archaea Archaea 52.8 0.027   NTclustered gi|2778339399|gb|CP042905.2| 2594042 g49264 i0 100 0.096551724137931 28 0 10 0 172 199 1297044 1297071 Promethearchaeum syntrophicum strain MK-D1 chromosome, complete genome blastn 28 52.8 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Promethearchaeum Promethearchaeum syntrophicum
17389326 17389326 PRJNA812001_P_NODE_75694_length_254_cov_1.690608_g75448_i0 PRJNA812001 75694 254 1.6906080000000001 4.29414432 Halobaculum marinum 3031996 Archaea Archaea 54.7 0.006   NTclustered gi|2463608140|gb|CP119989.1| 3031996 g75448 i0 100 0.114173228346457 29 0 11 0 161 189 649793 649821 Halobaculum marinum strain DT55 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum marinum
23762886 23762886 PRJNA812001_P_NODE_13179_length_441_cov_2.301630_g12933_i0 PRJNA812001 13179 441 2.30163 10.1501883 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 84.7 1.07e-16   NR MEM4326054.1 2026773 g12933 i0 38.7 1.38775510204082 106 64 72.1 1 408 91 140 244 MEM4326054.1 glutamate racemase [Candidatus Pacearchaeota archaeon] diamond 612 84.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
28096563 28096563 PRJNA812001_P_NODE_76305_length_253_cov_1.822222_g76059_i0 PRJNA812001 76305 253 1.822222 4.61022166 Nitrosotalea devaniterrae 1078905 Archaea Archaea 154 1.3499999999999997e-42   NR CUR51026.1 1078905 g76059 i0 85.7 0.99604743083004 84 12 99.6 0 1 252 408 491 CUR51026.1 tRNA-guanine(15) transglycosylase [Nitrosotalea devaniterrae] diamond 252 154 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea devaniterrae
28412375 28412375 PRJNA812001_P_NODE_135946_length_236_cov_3.822086_g135700_i0 PRJNA812001 135946 236 3.822086 9.02012296 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 135 2.04e-36   NR MCC5994635.1 3121606 g135700 i0 88.6 0.889830508474576 70 8 89 0 25 234 156 225 MCC5994635.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 210 135 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
29170219 29170219 PRJNA812001_P_NODE_66349_length_266_cov_5.476684_g66103_i0 PRJNA812001 66349 266 5.476684 14.56797944 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 174 1.92e-49   NR MCC5994579.1 3121606 g66103 i0 97.7 0.992481203007519 88 2 99.2 0 265 2 161 248 MCC5994579.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 264 174 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
29359620 29359620 PRJNA812001_P_NODE_5209_length_678_cov_13.080992_g4973_i0 PRJNA812001 5209 678 13.080992 88.68912576 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 103 1.7700000000000003e-21   NR MEM2002060.1 3058293 g4973 i0 48.6 0.464601769911504 105 54 46.5 0 317 3 918 1022 MEM2002060.1 RNase H-like domain-containing protein [Candidatus Methanomethylicaceae archaeon] diamond 315 103 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
29801462 29801462 PRJNA812001_P_NODE_70931_length_260_cov_2.240642_g70685_i0 PRJNA812001 70931 260 2.240642 5.8256692 Thermoproteota archaeon 2056631 Archaea Archaea 86.3 8.08e-18   NR MDT7864687.1 2056631 g70685 i0 95.1 0.473076923076923 41 2 47.3 0 138 16 284 324 MDT7864687.1 ribonucleotide-diphosphate reductase subunit beta [Thermoproteota archaeon] diamond 123 86.3 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
30022870 30022870 PRJNA812001_P_NODE_8791_length_526_cov_7.686534_g8546_i0 PRJNA812001 8791 526 7.686534 40.43116884 Halovenus sp. HT4 1954478 Archaea Archaea 295 4.55e-97   NR WP_336328368.1 3126691 g8546 i0 87.4 1.90494296577947 167 21 95.2 0 26 526 52 218 WP_336328368.1 glycine cleavage system aminomethyltransferase GcvT [Halovenus sp. HT40] diamond 1002 295 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halovenus Halovenus sp. HT40
30844265 30844265 PRJNA812001_P_NODE_136214_length_234_cov_2.627329_g135968_i0 PRJNA812001 136214 234 2.627329 6.14794986 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 133 5.45e-35   NR MCC5994578.1 3121606 g135968 i0 83.6 0.935897435897436 73 12 93.6 0 3 221 39 111 MCC5994578.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 219 133 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
31602987 31602987 PRJNA812001_P_NODE_137396_length_220_cov_4.748299_g137150_i0 PRJNA812001 137396 220 4.748299 10.4462578 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 131 9.88e-37   NR MCC5994577.1 3121606 g137150 i0 97 0.9 66 2 90 0 22 219 117 182 MCC5994577.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 198 131 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
31824128 31824128 PRJNA812001_P_NODE_137637_length_213_cov_3.071429_g137391_i0 PRJNA812001 137637 213 3.071429 6.54214377 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 134 3.49e-36   NR MCC5994730.1 3121606 g137391 i0 95.7 0.985915492957746 70 3 98.6 0 210 1 236 305 MCC5994730.1 AAA family ATPase [Candidatus Aenigmatarchaeota archaeon] diamond 210 134 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
32488939 32488939 PRJNA812001_P_NODE_15459_length_414_cov_6.023460_g15213_i0 PRJNA812001 15459 414 6.02346 24.9371244 Thermoproteota archaeon 2056631 Archaea Archaea 176 4.1e-54   NR MDT7864681.1 2056631 g15213 i0 92.3 0.659420289855073 91 7 65.9 0 119 391 37 127 MDT7864681.1 hypothetical protein [Thermoproteota archaeon] diamond 273 176 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
32583755 32583755 PRJNA812001_P_NODE_26079_length_349_cov_2.608696_g25833_i0 PRJNA812001 26079 349 2.608696 9.10434904 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 43.9 0.00688   NR MBS3146431.1 2026803 g25833 i0 29.9 0.66189111747851 77 42 66.2 2 254 24 16 80 MBS3146431.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 231 43.9 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
32772371 32772371 PRJNA812001_P_NODE_64100_length_270_cov_0.888325_g63854_i0 PRJNA812001 64100 270 0.888325 2.3984775 Methanosarcina sp. 2213 Archaea Archaea 46.2 0.00116   NR HET8686735.1 2213 g63854 i0 52.1 0.533333333333333 48 18 53.3 2 235 92 72 114 HET8686735.1 hypothetical protein [Methanosarcina sp.] diamond 144 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;