RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA812001", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA812001 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29801462 29801462 PRJNA812001_P_NODE_70931_length_260_cov_2.240642_g70685_i0 PRJNA812001 70931 260 2.240642 5.8256692 Thermoproteota archaeon 2056631 Archaea Archaea 86.3 8.08e-18   NR MDT7864687.1 2056631 g70685 i0 95.1 0.473076923076923 41 2 47.3 0 138 16 284 324 MDT7864687.1 ribonucleotide-diphosphate reductase subunit beta [Thermoproteota archaeon] diamond 123 86.3 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
32488939 32488939 PRJNA812001_P_NODE_15459_length_414_cov_6.023460_g15213_i0 PRJNA812001 15459 414 6.02346 24.9371244 Thermoproteota archaeon 2056631 Archaea Archaea 176 4.1e-54   NR MDT7864681.1 2056631 g15213 i0 92.3 0.659420289855073 91 7 65.9 0 119 391 37 127 MDT7864681.1 hypothetical protein [Thermoproteota archaeon] diamond 273 176 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;