RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA812001" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA812001 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5914132 5914132 PRJNA812001_P_NODE_45085_length_299_cov_1.163717_g44839_i0 PRJNA812001 45085 299 1.163717 3.47951383 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 403 6.66e-108   NTclustered gi|300676750|gb|GQ377668.1| 45107 g44839 i0 90.97 99.6789297658863 299 27 100 0 1 299 1022 724 Heteromita globosa actin gene, partial cds blastn 29804 403 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
9738591 9738591 PRJNA812001_P_NODE_23708_length_359_cov_3.664336_g23462_i0 PRJNA812001 23708 359 3.664336 13.15496624 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 298 3.96e-76   NTclustered gi|301014702|gb|GQ377715.1| 323453 g23462 i0 90.95 5.6991643454039 221 20 62 0 115 335 485 265 Heteromita sp. PRA-74 ribosomal protein S23a (rps23a) mRNA, complete cds blastn 2046 298 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
26642621 26642621 PRJNA812001_P_NODE_103261_length_246_cov_2.260116_g103015_i0 PRJNA812001 103261 246 2.260116 5.55988536 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.77e-4   NR YP_009118057.1 372086 g103015 i0 44.4 0.658536585365854 54 30 65.9 0 187 26 5 58 YP_009118057.1 ribosomal protein S3 [Paracercomonas marina] diamond 162 49.3 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;