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contig_metadata

19 rows where bioproject = "PRJNA812001", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 19 ✖

tax_kingdom 1

  • Pseudomonadati · 19 ✖

bioproject 1

  • PRJNA812001 · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2086139 2086139 PRJNA812001_P_NODE_18642_length_388_cov_1.676190_g18396_i0 PRJNA812001 18642 388 1.67619 6.5036172 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 143 5.999999999999998e-39   NR HVT14704.1 2651171 g18396 i0 58.8 2.80670103092783 119 49 92 0 24 380 30 148 HVT14704.1 P-type conjugative transfer ATPase TrbB [Thermoanaerobaculia bacterium] diamond 1089 143 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
6328494 6328494 PRJNA812001_P_NODE_54085_length_283_cov_2.109524_g53839_i0 PRJNA812001 54085 283 2.109524 5.96995292 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 116 6.269999999999999e-31   NR HEV8268601.1 2651171 g53839 i0 78.1 0.678445229681979 64 14 67.8 0 258 67 93 156 HEV8268601.1 phosphatidate cytidylyltransferase [Thermoanaerobaculia bacterium] diamond 192 116 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
12289545 12289545 PRJNA812001_P_NODE_119710_length_243_cov_1.429412_g119464_i0 PRJNA812001 119710 243 1.429412 3.47347116 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 60.8 5.96e-10   NR HEX7955401.1 2283092 g119464 i0 90.6 0.395061728395062 32 3 39.5 0 98 3 1 32 HEX7955401.1 tRNA-guanine transglycosylase [Pyrinomonadaceae bacterium] diamond 96 60.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
13563989 13563989 PRJNA812001_P_NODE_137991_length_199_cov_24.555556_g137745_i0 PRJNA812001 137991 199 24.555556 48.86555644 Acidobacteriota bacterium 1978231 Bacteria Bacteria 171 4.57e-38   NTclustered gi|2621706021|emb|OY764083.1| 1978231 g137745 i0 94.545 56.8994974874372 110 6 55 0 23 132 662604 662713 MAG: Acidobacteriota bacterium isolate 715e7d27-e149-44c2-9d7f-aa5f8d263fc4 genome assembly, chromosome: 1 blastn 11323 171 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
13564523 13564523 PRJNA812001_P_NODE_63811_length_270_cov_1.345178_g63565_i0 PRJNA812001 63811 270 1.345178 3.6319806 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 129 1.39e-33   NR HEV2852868.1 2651171 g63565 i0 90.8 3.61111111111111 65 6 72.2 0 1 195 312 376 HEV2852868.1 FemAB family XrtA/PEP-CTERM system-associated protein [Thermoanaerobaculia bacterium] diamond 975 129 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
14838381 14838381 PRJNA812001_P_NODE_107372_length_246_cov_0.890173_g107126_i0 PRJNA812001 107372 246 0.890173 2.18982558 Acidobacteriota bacterium 1978231 Bacteria Bacteria 169 7.08e-49   NR MBV8856821.1 1978231 g107126 i0 97.6 3 82 2 100 0 246 1 276 357 MBV8856821.1 beta-lactamase family protein [Acidobacteriota bacterium] diamond 738 169 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
16112879 16112879 PRJNA812001_P_NODE_16333_length_406_cov_1.750751_g16087_i0 PRJNA812001 16333 406 1.750751 7.10804906 Edaphobacter flagellatus 1933044 Bacteria Bacteria 726 0   NTclustered gi|2304905232|gb|CP073697.1| 1933044 g16087 i0 99.499 2.76600985221675 399 2 98 0 1 399 2488918 2489316 Edaphobacter flagellatus strain HZ411 chromosome, complete genome blastn 1123 726 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter flagellatus
19075930 19075930 PRJNA812001_P_NODE_11575_length_465_cov_2.747449_g11329_i0 PRJNA812001 11575 465 2.747449 12.77563785 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 106 1.32e-25   NR MCW5961576.1 2283092 g11329 i0 82.1 0.729032258064516 56 10 36.1 0 26 193 119 174 MCW5961576.1 DNA starvation/stationary phase protection protein [Pyrinomonadaceae bacterium] diamond 339 106 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26705832 26705832 PRJNA812001_P_NODE_120521_length_243_cov_0.905882_g120275_i0 PRJNA812001 120521 243 0.905882 2.20129326 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 95.5 2.26e-21   NR MEQ1728612.1 2910147 g120275 i0 66.2 2.62962962962963 71 24 87.7 0 2 214 256 326 MEQ1728612.1 NAD(P)H-quinone oxidoreductase [Vicinamibacterales bacterium] diamond 639 95.5 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
27591594 27591594 PRJNA812001_P_NODE_93044_length_248_cov_1.765714_g92798_i0 PRJNA812001 93044 248 1.765714 4.37897072 Terriglobales bacterium 2282142 Bacteria Bacteria 44.3 0.0113   NR HVP14815.1 2282142 g92798 i0 30.7 7.77822580645161 75 44 85.9 2 5 217 155 225 HVP14815.1 ATP-binding protein [Terriglobales bacterium] diamond 1929 44.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27654695 27654695 PRJNA812001_P_NODE_2144_length_1027_cov_7.640461_g1956_i0 PRJNA812001 2144 1027 7.640461 78.46753447 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 262 1.01e-82   NR HZT37293.1 2212468 g1956 i0 54.4 0.72444011684518 248 111 71.9 1 763 26 5 252 HZT37293.1 IPT/TIG domain-containing protein [Bryobacteraceae bacterium] diamond 744 262 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
27686443 27686443 PRJNA812001_P_NODE_104964_length_246_cov_0.890173_g104718_i0 PRJNA812001 104964 246 0.890173 2.18982558 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 159 1.94e-47   NR HEV2828927.1 2283092 g104718 i0 88.9 0.98780487804878 81 9 98.8 0 244 2 99 179 HEV2828927.1 redoxin domain-containing protein [Pyrinomonadaceae bacterium] diamond 243 159 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28285804 28285804 PRJNA812001_P_NODE_123746_length_243_cov_0.905882_g123500_i0 PRJNA812001 123746 243 0.905882 2.20129326 Acidobacteria bacterium RIFCSPLOWO2_ 1797182 Bacteria Bacteria 92 8.75e-21   NR OFW17594.1 1797182 g123500 i0 82.1 2.08641975308642 56 10 69.1 0 242 75 169 224 OFW17594.1 MAG: 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase [Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29] diamond 507 92 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29
28326217 28326217 PRJNA812001_P_NODE_134666_length_241_cov_0.916667_g134420_i0 PRJNA812001 134666 241 0.916667 2.20916747 Bryobacterales 332160 Bacteria Bacteria 67 9.63e-11   NR HEY3840184.1 2212468 g134420 i0 39.5 1.87966804979253 76 44 94.6 1 236 9 172 245 HEY3840184.1 hypothetical protein [Bryobacteraceae bacterium] diamond 453 67 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28444040 28444040 PRJNA812001_P_NODE_826_length_1500_cov_11.819902_g724_i0 PRJNA812001 826 1500 11.819902 177.29853 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 426 1.21e-140   NR HLH00567.1 2212468 g724 i0 49.3 2.884 475 232 95 5 10 1434 80 545 HLH00567.1 hypothetical protein [Bryobacteraceae bacterium] diamond 4326 426 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30180577 30180577 PRJNA812001_P_NODE_96972_length_248_cov_0.880000_g96726_i0 PRJNA812001 96972 248 0.88 2.1824 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 142 1.1099999999999999e-39   NR HMC77707.1 2910147 g96726 i0 76.5 0.979838709677419 81 19 98 0 247 5 120 200 HMC77707.1 metallophosphoesterase [Vicinamibacterales bacterium] diamond 243 142 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30370694 30370694 PRJNA812001_P_NODE_71672_length_259_cov_2.354839_g71426_i0 PRJNA812001 71672 259 2.354839 6.09903301 Blastocatellia bacterium 2052146 Bacteria Bacteria 179 3.6e-50   NR MCS6818293.1 2052146 g71426 i0 94.2 0.996138996138996 86 5 99.6 0 258 1 379 464 MCS6818293.1 carboxypeptidase-like regulatory domain-containing protein [Blastocatellia bacterium] diamond 258 179 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
30844263 30844263 PRJNA812001_P_NODE_115434_length_244_cov_0.900585_g115188_i0 PRJNA812001 115434 244 0.900585 2.1974274 Edaphobacter aggregans 570835 Bacteria Bacteria 136 1.1800000000000001e-36   NR WP_051979169.1 570835 g115188 i0 86.1 1.77049180327869 72 10 88.5 0 242 27 293 364 WP_051979169.1 PQQ-dependent sugar dehydrogenase [Edaphobacter aggregans] diamond 432 136 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter aggregans
31096832 31096832 PRJNA812001_P_NODE_7835_length_554_cov_1.120582_g7590_i0 PRJNA812001 7835 554 1.120582 6.20802428 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 113 8.19e-29   NR HEY1218840.1 2212468 g7590 i0 45.6 0.736462093862816 136 46 73.6 1 411 4 1 108 HEY1218840.1 MmcQ/YjbR family DNA-binding protein [Bryobacteraceae bacterium] diamond 408 113 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;