RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA812001", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA812001 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26990741 26990741 PRJNA812001_P_NODE_16322_length_406_cov_2.819820_g16076_i0 PRJNA812001 16322 406 2.81982 11.4484692 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 193 1.8299999999999995e-54   NR CAF2474744.1 2762512 g16076 i0 80 1.69950738916256 115 21 85 1 2 346 766 878 CAF2474744.1 unnamed protein product [Rotaria sp. Silwood2] diamond 690 193 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
30022859 30022859 PRJNA812001_P_NODE_11211_length_471_cov_3.454774_g10965_i0 PRJNA812001 11211 471 3.454774 16.27198554 Adineta vaga 104782 Rotifera other_Eukaryota 130 9.1e-33   NR UJR16142.1 104782 g10965 i0 47.9 3.59872611464968 142 70 87.9 2 455 42 252 393 UJR16142.1 hypothetical protein I4U23_003053 [Adineta vaga] diamond 1695 130 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
31508161 31508161 PRJNA812001_P_NODE_7676_length_559_cov_7.302469_g7431_i0 PRJNA812001 7676 559 7.302469 40.82080171 Adineta vaga 104782 Rotifera other_Eukaryota 232 1.26e-72   NR UJR20658.1 104782 g7431 i0 79.9 0.826475849731664 154 30 82.1 1 534 76 172 325 UJR20658.1 hypothetical protein I4U23_023780 [Adineta vaga] diamond 462 232 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;