RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA812001", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA812001 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2086539 2086539 PRJNA812001_P_NODE_6042_length_631_cov_7.801075_g5801_i0 PRJNA812001 6042 631 7.801075 49.22478325 Paralvinella palmiformis 53620 Annelida Annelida 124 2.6699999999999993e-31   NR KAK2144878.1 53620 g5801 i0 54.4 0.541996830427892 114 50 53.7 2 582 244 114 226 KAK2144878.1 hypothetical protein LSH36_722g00000 [Paralvinella palmiformis] diamond 342 124 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
7188935 7188935 PRJNA812001_P_NODE_4386_length_737_cov_3.923193_g4157_i0 PRJNA812001 4386 737 3.923193 28.91393241 Hirudo verbana 311461 Annelida Annelida 58.4 0.002   NTclustered gi|2918369613|emb|OZ237779.1| 311461 g4157 i0 97.059 0.564450474898236 34 1 6 0 445 478 16353220 16353253 Hirudo verbana genome assembly, chromosome: 1 blastn 416 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
8463566 8463566 PRJNA812001_P_NODE_24827_length_354_cov_2.313167_g24581_i0 PRJNA812001 24827 354 2.313167 8.18861118 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.033   NTclustered gi|2920003508|emb|OZ238866.1| 1046305 g24581 i0 100 0.0790960451977401 28 0 8 0 222 249 20519712 20519685 Ailoscolex lacteospumosus genome assembly, chromosome: 7 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;