RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA812001", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA812001 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27938800 27938800 PRJNA812001_P_NODE_43345_length_302_cov_3.558952_g43099_i0 PRJNA812001 43345 302 3.558952 10.74803504 Dimargaris verticillata 2761393 Fungi Fungi 67 1.68e-10   NR KAJ1975618.1 2761393 g43099 i0 55.4 1.8476821192053 65 19 64.6 2 17 211 274 328 KAJ1975618.1 malate DEHYDROGENASE, NAD-dependent [Dimargaris verticillata] diamond 558 67 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dimargaris Dimargaris verticillata
30749390 30749390 PRJNA812001_P_NODE_4774_length_708_cov_6.034646_g4540_i0 PRJNA812001 4774 708 6.034646 42.72529368 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 267 9.75e-88   NR ORX96007.1 1314790 g4540 i0 75.1 0.783898305084746 185 45 78.4 1 59 613 1 184 ORX96007.1 ribosomal protein L18e [Basidiobolus meristosporus CBS 931.73] diamond 555 267 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus
32803882 32803882 PRJNA812001_P_NODE_35880_length_319_cov_15.280488_g35634_i0 PRJNA812001 35880 319 15.280488 48.74475672 Conidiobolus coronatus NRRL 28638 796925 Fungi Fungi 72.8 3.68e-13   NR KXN69958.1 796925 g35634 i0 73.5 4.73040752351097 49 13 46.1 0 24 170 116 164 KXN69958.1 ribosomal protein L13 [Conidiobolus coronatus NRRL 28638] diamond 1509 72.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus coronatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;