contig_metadata
13 rows where bioproject = "PRJNA812001", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23762871 | 23762871 | PRJNA812001_P_NODE_129239_length_242_cov_0.911243_g128993_i0 | PRJNA812001 | 129239 | 242 | 0.911243 | 2.20520806 | Candidatus Limnocylindrales bacterium | 2952938 | Bacteria | Bacteria | 149 | 4.12e-42 | NR | HEU0235319.1 | 2952938 | g128993 | i0 | 88.8 | 0.991735537190083 | 80 | 9 | 99.2 | 0 | 241 | 2 | 183 | 262 | HEU0235319.1 glycosyltransferase [Candidatus Limnocylindrales bacterium] | diamond | 240 | 149 | 1 | Bacteria | Bacillati | Chloroflexota | Candidatus Limnocylindria | Candidatus Limnocylindrales | Candidatus Limnocylindrales bacterium | ||||
| 26674100 | 26674100 | PRJNA812001_P_NODE_4801_length_706_cov_8.612954_g4567_i0 | PRJNA812001 | 4801 | 706 | 8.612954 | 60.80745524 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 117 | 1.2599999999999998e-29 | NR | HCF99586.1 | 2026724 | g4567 | i0 | 52.7 | 0.386685552407932 | 91 | 41 | 37.8 | 1 | 101 | 367 | 10 | 100 | HCF99586.1 hypothetical protein [Chloroflexota bacterium] | diamond | 273 | 117 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 26801026 | 26801026 | PRJNA812001_P_NODE_8121_length_545_cov_2.012712_g7876_i0 | PRJNA812001 | 8121 | 545 | 2.012712 | 10.9692804 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 163 | 5.2999999999999994e-46 | NR | HUM70551.1 | 2026724 | g7876 | i0 | 52 | 1.65688073394495 | 152 | 73 | 83.7 | 0 | 75 | 530 | 18 | 169 | HUM70551.1 mechanosensitive ion channel [Chloroflexota bacterium] | diamond | 903 | 163 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 27243921 | 27243921 | PRJNA812001_P_NODE_97403_length_248_cov_0.880000_g97157_i0 | PRJNA812001 | 97403 | 248 | 0.88 | 2.1824 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 147 | 4e-39 | NR | MFN8622296.1 | 2026724 | g97157 | i0 | 84.1 | 0.991935483870968 | 82 | 13 | 99.2 | 0 | 3 | 248 | 128 | 209 | MFN8622296.1 phage holin family protein [Chloroflexota bacterium] | diamond | 246 | 147 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 27568506 | 27568506 | PRJNA812001_P_NODE_2064_length_1045_cov_10.765432_g1878_i0 | PRJNA812001 | 2064 | 1045 | 10.765432 | 112.4987644 | Chloroflexota | 200795 | Bacteria | Bacteria | 382 | 5.909999999999999e-126 | NR | MEZ4644498.1 | 2026724 | g1878 | i0 | 71.4 | 3.00861244019139 | 262 | 75 | 75.2 | 0 | 791 | 6 | 1 | 262 | MEZ4644498.1 ABC-F family ATP-binding cassette domain-containing protein [Chloroflexota bacterium] | diamond | 3144 | 382 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 27884319 | 27884319 | PRJNA812001_P_NODE_46345_length_296_cov_1.381166_g46099_i0 | PRJNA812001 | 46345 | 296 | 1.381166 | 4.08825136 | Candidatus Hadersleviella | 3140594 | Bacteria | Bacteria | 119 | 1.67e-30 | NR | MEK6220982.1 | 2026724 | g46099 | i0 | 63.2 | 4.81418918918919 | 95 | 35 | 96.3 | 0 | 2 | 286 | 109 | 203 | MEK6220982.1 mechanosensitive ion channel [Chloroflexota bacterium] | diamond | 1425 | 119 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 27915769 | 27915769 | PRJNA812001_P_NODE_84125_length_250_cov_0.870056_g83879_i0 | PRJNA812001 | 84125 | 250 | 0.870056 | 2.17514 | PVC group | 1783257 | Bacteria | Bacteria | 150 | 6.7e-40 | NR | HKZ87327.1 | 2052143 | g83879 | i0 | 85.4 | 2.952 | 82 | 12 | 98.4 | 0 | 248 | 3 | 697 | 778 | HKZ87327.1 fructose 1,6-bisphosphatase [Anaerolineae bacterium] | diamond | 738 | 151 | 0.993377483443709 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 28064980 | 28064980 | PRJNA812001_P_NODE_70025_length_262_cov_1.158730_g69779_i0 | PRJNA812001 | 70025 | 262 | 1.15873 | 3.0358726 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 63.9 | 1.55e-9 | NR | MEX0800812.1 | 2026734 | g69779 | i0 | 40 | 0.973282442748092 | 85 | 50 | 96.2 | 1 | 3 | 254 | 50 | 134 | MEX0800812.1 right-handed parallel beta-helix repeat-containing protein [Dehalococcoidia bacterium] | diamond | 255 | 63.9 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 28191069 | 28191069 | PRJNA812001_P_NODE_7726_length_557_cov_3.907025_g7481_i0 | PRJNA812001 | 7726 | 557 | 3.907025 | 21.76212925 | Dehalococcoidales bacterium | 2026733 | Bacteria | Bacteria | 80.1 | 9.76e-16 | NR | MDD4986684.1 | 2026733 | g7481 | i0 | 46.4 | 1.10412926391382 | 110 | 46 | 58.2 | 4 | 155 | 478 | 14 | 112 | MDD4986684.1 hypothetical protein [Dehalococcoidales bacterium] | diamond | 615 | 80.1 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidales | Dehalococcoidales bacterium | ||||
| 29327882 | 29327882 | PRJNA812001_P_NODE_7609_length_562_cov_2.523517_g7364_i0 | PRJNA812001 | 7609 | 562 | 2.523517 | 14.18216554 | Ardenticatenaceae bacterium | 2614247 | Bacteria | Bacteria | 143 | 8.98e-38 | NR | HEX8683168.1 | 2614247 | g7364 | i0 | 73.4 | 0.501779359430605 | 94 | 25 | 50.2 | 0 | 344 | 63 | 260 | 353 | HEX8683168.1 tryptophan--tRNA ligase [Ardenticatenaceae bacterium] | diamond | 282 | 143 | 1 | Bacteria | Bacillati | Chloroflexota | Ardenticatenia | Ardenticatenales | Ardenticatenaceae | Ardenticatenaceae bacterium | |||
| 29778745 | 29778745 | PRJNA812001_P_NODE_6611_length_602_cov_5.353497_g6367_i0 | PRJNA812001 | 6611 | 602 | 5.353497 | 32.22805194 | Bacteria | 2 | Bacteria | Bacteria | 67.8 | 1.95e-9 | NR | MEW5940205.1 | 2026724 | g6367 | i0 | 38.2 | 2.62126245847176 | 89 | 49 | 43.4 | 3 | 264 | 4 | 1 | 85 | MEW5940205.1 creatininase family protein [Chloroflexota bacterium] | diamond | 1578 | 68.2 | 0.994134897360704 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 31982352 | 31982352 | PRJNA812001_P_NODE_54158_length_283_cov_1.600000_g53912_i0 | PRJNA812001 | 54158 | 283 | 1.6 | 4.528 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 42.4 | 0.0299 | NR | HJM88493.1 | 2026734 | g53912 | i0 | 30.1 | 0.985865724381625 | 93 | 57 | 96.5 | 3 | 3 | 275 | 12 | 98 | HJM88493.1 hypothetical protein [Dehalococcoidia bacterium] | diamond | 279 | 42.4 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 32709414 | 32709414 | PRJNA812001_P_NODE_107840_length_246_cov_0.890173_g107594_i0 | PRJNA812001 | 107840 | 246 | 0.890173 | 2.18982558 | Chloroflexia bacterium | 2448782 | Bacteria | Bacteria | 72.4 | 1.31e-12 | NR | HYP42219.1 | 2448782 | g107594 | i0 | 47.4 | 0.926829268292683 | 76 | 37 | 92.7 | 1 | 229 | 2 | 257 | 329 | HYP42219.1 HD domain-containing phosphohydrolase [Chloroflexia bacterium] | diamond | 228 | 72.4 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;