RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA812001" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA812001 · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22487507 22487507 PRJNA812001_P_NODE_41058_length_307_cov_2.790598_g40812_i0 PRJNA812001 41058 307 2.790598 8.56713586 Thecamonas trahens 529818 Root_unresolved Root_unresolved 58.4 6.16e-4   NTclustered gi|923130502|ref|XM_013903263.1| 461836 g40812 i0 85.965 0.280130293159609 57 5 18 3 110 164 1365 1310 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_04376), partial mRNA blastn 86 58.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27843811 27843811 PRJNA812001_P_NODE_136144_length_234_cov_15.093168_g135898_i0 PRJNA812001 136144 234 15.093168 35.31801312 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 55.8 7.41e-7   NR XP_013756156.1 461836 g135898 i0 51 0.653846153846154 51 25 65.4 0 156 4 270 320 XP_013756156.1 metal tolerance protein [Thecamonas trahens ATCC 50062] diamond 153 55.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;