RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA811725" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA811725 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5913473 5913473 PRJNA811725_P_NODE_40505_length_243_cov_1.358824_g40259_i0 PRJNA811725 40505 243 1.358824 3.30194232 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 76.8 1.3e-9   NTclustered gi|2893358436|emb|OZ220728.1| 2910147 g40259 i0 94.118 8.85185185185185 51 2 21 1 97 146 5472665 5472615 MAG: Vicinamibacterales bacterium isolate 73bbec36-abbb-48ff-8f96-0d8513c84f17 genome assembly, chromosome: 1 blastn 2151 76.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
26610896 26610896 PRJNA811725_P_NODE_8461_length_507_cov_2.324885_g8218_i0 PRJNA811725 8461 507 2.324885 11.78716695 Terriglobales bacterium 2282142 Bacteria Bacteria 137 3.57e-38   NR HZE26521.1 2282142 g8218 i0 86.1 0.93491124260355 79 11 46.7 0 505 269 69 147 HZE26521.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH [Terriglobales bacterium] diamond 474 137 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27370668 27370668 PRJNA811725_P_NODE_9903_length_472_cov_6.210526_g9659_i0 PRJNA811725 9903 472 6.210526 29.31368272 Acidobacteriota bacterium 1978231 Bacteria Bacteria 153 1.1199999999999996e-43   NR PYX82246.1 1978231 g9659 i0 68.6 4.03601694915254 105 33 66.7 0 471 157 96 200 PYX82246.1 MAG: DNA-3-methyladenine glycosylase [Acidobacteriota bacterium] diamond 1905 153 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28159903 28159903 PRJNA811725_P_NODE_30505_length_282_cov_1.473684_g30259_i0 PRJNA811725 30505 282 1.473684 4.15578888 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 90.9 5.66e-19   NR HEY6972037.1 2976921 g30259 i0 54.3 8.85106382978723 92 41 97.9 1 280 5 38 128 HEY6972037.1 hypothetical protein [Candidatus Angelobacter sp.] diamond 2496 90.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
29864692 29864692 PRJNA811725_P_NODE_26431_length_299_cov_2.659292_g26185_i0 PRJNA811725 26431 299 2.659292 7.95128308 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 61.6 4.25e-9   NR HEX8186727.1 2283092 g26185 i0 58 0.501672240802676 50 19 48.2 2 146 3 60 109 HEX8186727.1 DUF1572 family protein [Pyrinomonadaceae bacterium] diamond 150 61.6 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30410972 30410972 PRJNA811725_P_NODE_8493_length_506_cov_3.986143_g8250_i0 PRJNA811725 8493 506 3.986143 20.16988358 Bacteria 2 Bacteria Bacteria 50.8 7.86e-4   NR HKN72360.1 2282142 g8250 i0 52.2 0.74703557312253 46 22 27.3 0 361 498 346 391 HKN72360.1 PAS domain S-box protein [Terriglobales bacterium] diamond 378 51.2 0.9921875 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
31254903 31254903 PRJNA811725_P_NODE_9655_length_477_cov_3.430693_g9411_i0 PRJNA811725 9655 477 3.430693 16.36440561 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 250 4.58e-75   NR HXI74091.1 2283092 g9411 i0 81.9 0.937106918238994 149 27 93.7 0 2 448 441 589 HXI74091.1 carboxypeptidase-like regulatory domain-containing protein [Pyrinomonadaceae bacterium] diamond 447 250 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;