RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA811714", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA811714 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7601799 7601799 PRJNA811714_P_NODE_8446_length_327_cov_6.330709_g8253_i0 PRJNA811714 8446 327 6.330709 20.70141843 Metazoa 33208 Platyhelminthes Platyhelminthes 604 1.8799999999999993e-168   NTclustered gi|60599826|gb|AY810568.1| 6182 g8253 i0 100 31.9327217125382 327 0 100 0 1 327 354 28 Schistosoma japonicum clone SJCHGC08893 unknown mRNA blastn 10442 604 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
20350001 20350001 PRJNA811714_P_NODE_16576_length_260_cov_6.946524_g16383_i0 PRJNA811714 16576 260 6.946524 18.0609624 Rhabdocoela 27901 Platyhelminthes Platyhelminthes 89.8 1.81e-13   NTclustered gi|14530151|emb|AJ315645.1| 84153 g16383 i0 86.585 14.0769230769231 82 10 31 1 77 157 837 918 Maehrenthalia agilis partial 28S rRNA gene blastn 3660 89.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Byrsophlebidae Maehrenthalia Maehrenthalia agilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;