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contig_metadata

25 rows where bioproject = "PRJNA811237", tax_phylum = "Thermodesulfobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 25 ✖

tax_phylum 1

  • Thermodesulfobacteriota · 25 ✖

tax_kingdom 1

bioproject 1

  • PRJNA811237 · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2084548 2084548 PRJNA811237_S_NODE_8762_length_256_cov_1.362319_g8522_i0 PRJNA811237 8762 256 1.362319 3.48753664 Geopsychrobacteraceae bacterium 3065857 Bacteria Bacteria 52.8 0.023   NTclustered gi|2621703259|emb|OY762430.1| 3065857 g8522 i0 100 0.109375 28 0 11 0 188 215 1228970 1228997 MAG: Geopsychrobacteraceae bacterium isolate 31ebb314-3b6f-4c34-9fd3-1c731cc0fcc3 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Geopsychrobacteraceae   Geopsychrobacteraceae bacterium
3359727 3359727 PRJNA811237_S_NODE_25563_length_172_cov_1.211382_g25323_i0 PRJNA811237 25563 172 1.211382 2.08357704 Syntrophus sp. (in: bacteria) 48412 Bacteria Bacteria 63.2 8.21e-10   NR MEI6314261.1 48412 g25323 i0 65.7 1.20348837209302 35 12 61 0 1 105 300 334 MEI6314261.1 PHB depolymerase family esterase [Syntrophus sp. (in: bacteria)] diamond 207 63.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae Syntrophus Syntrophus sp. (in: bacteria)
9736910 9736910 PRJNA811237_S_NODE_4228_length_353_cov_1.513158_g3988_i0 PRJNA811237 4228 353 1.513158 5.3414477400000004 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 154 6.26e-46   NR GJM17744.1 2202153 g3988 i0 74.3 0.858356940509915 101 26 85.8 0 352 50 27 127 GJM17744.1 MAG: hypothetical protein DHS20C13_30710 [Thermodesulfobacteriota bacterium] diamond 303 154 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
21211065 21211065 PRJNA811237_S_NODE_9957_length_243_cov_2.046392_g9717_i0 PRJNA811237 9957 243 2.046392 4.97273256 Desulfovibrio aminophilus 81425 Bacteria Bacteria 54.7 0.006   NTclustered gi|2908463109|gb|CP168306.1| 81425 g9717 i0 100 0.119341563786008 29 0 12 0 212 240 2340627 2340599 MAG: Desulfovibrio aminophilus isolate Co chromosome, complete genome blastn 29 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio aminophilus
26610879 26610879 PRJNA811237_S_NODE_29381_length_166_cov_0.871795_g29141_i0 PRJNA811237 29381 166 0.871795 1.4471797 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 42.7 0.0135   NR HAO22905.1 2049433 g29141 i0 47.7 1.64457831325301 44 20 79.5 1 2 133 183 223 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 273 42.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
26990706 26990706 PRJNA811237_S_NODE_12562_length_223_cov_2.385057_g12322_i0 PRJNA811237 12562 223 2.385057 5.31867711 Syntrophales bacterium 2928017 Bacteria Bacteria 46.6 7.43e-4   NR MCU0582833.1 2928017 g12322 i0 35.2 1.88340807174888 71 34 95.5 1 9 221 8 66 MCU0582833.1 lipocalin family protein [Syntrophales bacterium] diamond 420 46.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales     Syntrophales bacterium
27125873 27125873 PRJNA811237_S_NODE_27362_length_167_cov_1.296610_g27122_i0 PRJNA811237 27362 167 1.29661 2.1653387 root 1 Root_unresolved Root_unresolved 63.9 4.43e-10   NR WP_021760551.1 879 g27122 i0 52.7 6.91616766467066 55 26 98.8 0 165 1 298 352 WP_021760551.1 endopeptidase La [Megalodesulfovibrio gigas] diamond 1155 63.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Megalodesulfovibrio Megalodesulfovibrio gigas
27275551 27275551 PRJNA811237_S_NODE_26083_length_170_cov_1.685950_g25843_i0 PRJNA811237 26083 170 1.68595 2.866115 Syntrophobacteraceae bacterium 2052185 Bacteria Bacteria 75.9 2.15e-14   NR NTU48933.1 2052185 g25843 i0 61.8 11.7529411764706 55 21 97.1 0 168 4 26 80 NTU48933.1 acetyl-CoA C-acetyltransferase [Syntrophobacteraceae bacterium] diamond 1998 75.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae   Syntrophobacteraceae bacterium
27410983 27410983 PRJNA811237_S_NODE_13303_length_219_cov_1.394118_g13063_i0 PRJNA811237 13303 219 1.394118 3.05311842 Pseudomonadati 3379134 Bacteria Bacteria 90.1 5.61e-19   NR NPU84935.1 2052184 g13063 i0 52.9 5.72602739726027 70 33 95.9 0 212 3 161 230 NPU84935.1 peptidase M16 [Syntrophaceae bacterium] diamond 1254 90.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium
27718085 27718085 PRJNA811237_S_NODE_9524_length_248_cov_1.025126_g9284_i0 PRJNA811237 9524 248 1.025126 2.54231248 Desulfolutivibrio sp. 2773296 Bacteria Bacteria 46.6 0.00123   NR WP_332110554.1 2773296 g9284 i0 39.1 0.834677419354839 69 38 83.5 2 235 29 42 106 WP_332110554.1 peptidoglycan-binding protein [Desulfolutivibrio sp.] diamond 207 46.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfolutivibrio Desulfolutivibrio sp.
27749464 27749464 PRJNA811237_S_NODE_20344_length_188_cov_1.366906_g20104_i0 PRJNA811237 20344 188 1.366906 2.56978328 Desulfovibrionaceae bacterium 2049043 Bacteria Bacteria 77.4 1.18e-15   NR MBG0776896.1 2049043 g20104 i0 63.2 0.909574468085106 57 21 91 0 181 11 120 176 MBG0776896.1 NAD(P)H:quinone oxidoreductase [Desulfovibrionaceae bacterium] diamond 171 77.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae   Desulfovibrionaceae bacterium
27915754 27915754 PRJNA811237_S_NODE_16085_length_205_cov_1.275641_g15845_i0 PRJNA811237 16085 205 1.275641 2.61506405 Bacteria 2 Bacteria Bacteria 47.4 1.06e-4   NR MDD5170571.1 2928017 g15845 i0 51.2 5.5609756097561 43 21 62.9 0 6 134 40 82 MDD5170571.1 RNA-binding protein [Syntrophales bacterium] diamond 1140 47.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales     Syntrophales bacterium
27915755 27915755 PRJNA811237_S_NODE_21245_length_185_cov_1.125000_g21005_i0 PRJNA811237 21245 185 1.125 2.08125 Pseudomonadati 3379134 Bacteria Bacteria 55.5 5.47e-7   NR MDX9818504.1 897 g21005 i0 50 12.2918918918919 56 28 90.8 0 185 18 228 283 MDX9818504.1 adenylate/guanylate cyclase domain-containing protein [Desulfococcus multivorans] diamond 2274 55.8 0.99462365591397806 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae Desulfococcus Desulfococcus multivorans
27938760 27938760 PRJNA811237_S_NODE_21265_length_185_cov_1.125000_g21025_i0 PRJNA811237 21265 185 1.125 2.08125 Desulfuromonadaceae bacterium 2099677 Bacteria Bacteria 91.7 8.72e-20   NR HXF09501.1 2099677 g21025 i0 78.6 2.78918918918919 56 12 90.8 0 17 184 244 299 HXF09501.1 glycoside hydrolase family 130 protein [Desulfuromonadaceae bacterium] diamond 516 91.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae   Desulfuromonadaceae bacterium
28475467 28475467 PRJNA811237_S_NODE_26646_length_169_cov_1.141667_g26406_i0 PRJNA811237 26646 169 1.141667 1.92941723 Desulfovibrio cuneatus 159728 Bacteria Bacteria 54.7 3.76e-7   NR WP_051258216.1 159728 g26406 i0 51.8 3 56 26 99.4 1 168 1 23 77 WP_051258216.1 pesticin C-terminus-like muramidase [Desulfovibrio cuneatus] diamond 507 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio cuneatus
28664949 28664949 PRJNA811237_S_NODE_31567_length_164_cov_0.886957_g31327_i0 PRJNA811237 31567 164 0.886957 1.45460948 Syntrophaceae bacterium 2052184 Bacteria Bacteria 54.7 1.4e-7   NR NPV06123.1 2052184 g31327 i0 43.6 1.00609756097561 55 30 98.8 1 162 1 78 132 NPV06123.1 glycine cleavage system protein GcvH [Syntrophaceae bacterium] diamond 165 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium
29296344 29296344 PRJNA811237_S_NODE_19489_length_191_cov_1.436620_g19249_i0 PRJNA811237 19489 191 1.43662 2.7439442 Desulfovibrionaceae bacterium 2049043 Bacteria Bacteria 41.2 0.0354   NR MCL2124317.1 2049043 g19249 i0 36.9 1.02094240837696 65 35 92.7 2 2 178 41 105 MCL2124317.1 NAD(P)H-hydrate epimerase [Desulfovibrionaceae bacterium] diamond 195 41.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae   Desulfovibrionaceae bacterium
29327839 29327839 PRJNA811237_S_NODE_22869_length_180_cov_1.145038_g22629_i0 PRJNA811237 22869 180 1.145038 2.0610684 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 42 0.027   NR GJM17643.1 2202153 g22629 i0 37.5 0.666666666666667 40 25 66.7 0 120 1 133 172 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 120 42 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29327844 29327844 PRJNA811237_S_NODE_25349_length_172_cov_2.032520_g25109_i0 PRJNA811237 25349 172 2.03252 3.4959344 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 87 3.14e-20   NR GJM17742.1 2202153 g25109 i0 68.4 0.994186046511628 57 18 99.4 0 1 171 19 75 GJM17742.1 MAG: hypothetical protein DHS20C13_30690 [Thermodesulfobacteriota bacterium] diamond 171 87 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30243940 30243940 PRJNA811237_S_NODE_13112_length_220_cov_1.771930_g12872_i0 PRJNA811237 13112 220 1.77193 3.898246 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 52.4 1.11e-5   NR MEW6347748.1 2202153 g12872 i0 49.1 0.722727272727273 53 25 69.5 2 67 219 236 288 MEW6347748.1 DUF4384 domain-containing protein [Thermodesulfobacteriota bacterium] diamond 159 52.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30379399 30379399 PRJNA811237_S_NODE_6972_length_281_cov_1.853448_g6732_i0 PRJNA811237 6972 281 1.853448 5.20818888 Pseudomonadati 3379134 Bacteria Bacteria 44.3 0.0052   NR WP_078789057.1 115783 g6732 i0 60 1.29181494661922 35 13 37.4 1 9 113 87 120 WP_078789057.1 glycine cleavage system protein GcvH [Trichlorobacter thiogenes] diamond 363 44.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Trichlorobacter Trichlorobacter thiogenes
31034027 31034027 PRJNA811237_S_NODE_995_length_705_cov_4.237805_g791_i0 PRJNA811237 995 705 4.237805 29.87652525 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 47 0.0219   NR GJM17643.1 2202153 g791 i0 29.5 0.331914893617021 78 54 32.8 1 692 462 135 212 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 234 47 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31760955 31760955 PRJNA811237_S_NODE_25597_length_172_cov_1.016260_g25357_i0 PRJNA811237 25597 172 1.01626 1.7479672 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 44.3 0.00386   NR MFC1858079.1 2202153 g25357 i0 46.5 0.75 43 23 75 0 42 170 29 71 MFC1858079.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 129 44.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31991183 31991183 PRJNA811237_S_NODE_29098_length_166_cov_0.871795_g28858_i0 PRJNA811237 29098 166 0.871795 1.4471797 Pseudomonadati 3379134 Bacteria Bacteria 54.7 3.13e-7   NR MDD5758336.1 2053307 g28858 i0 64.3 2.43975903614458 42 10 75.9 1 3 128 66 102 MDD5758336.1 hypothetical protein [Desulfobulbaceae bacterium] diamond 405 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
32583744 32583744 PRJNA811237_S_NODE_9519_length_248_cov_1.025126_g9279_i0 PRJNA811237 9519 248 1.025126 2.54231248 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 86.7 1.37e-17   NR HAO22905.1 2049433 g9279 i0 44.4 0.979838709677419 81 45 98 0 248 6 316 396 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 243 86.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;