RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA811237" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA811237 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26705804 26705804 PRJNA811237_S_NODE_28161_length_167_cov_0.864407_g27921_i0 PRJNA811237 28161 167 0.864407 1.44355969 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.8 3.16e-7   NR MFA6270074.1 2053589 g27921 i0 59.6 4.04191616766467 47 15 82.6 2 162 25 585 628 MFA6270074.1 carbohydrate-binding protein [Candidatus Paceibacterota bacterium] diamond 675 55.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27022601 27022601 PRJNA811237_S_NODE_15142_length_209_cov_1.275000_g14902_i0 PRJNA811237 15142 209 1.275 2.66475 Minisyncoccota bacterium 2053589 Bacteria Bacteria 42 0.0111   NR MDD2913601.1 2053589 g14902 i0 57.1 1.03349282296651 28 12 40.2 0 200 117 21 48 MDD2913601.1 thioredoxin domain-containing protein [Candidatus Paceibacterota bacterium] diamond 216 42 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27307270 27307270 PRJNA811237_S_NODE_25503_length_172_cov_1.243902_g25263_i0 PRJNA811237 25503 172 1.243902 2.13951144 Minisyncoccota bacterium 2053589 Bacteria Bacteria 52.8 4.2e-6   NR MEZ0208671.1 2053589 g25263 i0 45.5 0.959302325581395 55 30 95.9 0 8 172 220 274 MEZ0208671.1 reverse transcriptase domain-containing protein [Candidatus Paceibacterota bacterium] diamond 165 52.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;