RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA811237" and tax_phylum = "Kiritimatiellota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA811237 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29548746 29548746 PRJNA811237_S_NODE_33770_length_162_cov_0.902655_g33530_i0 PRJNA811237 33770 162 0.902655 1.4623011 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 41.6 0.0256   NR MBO7181535.1 2212473 g33530 i0 33.3 0.888888888888889 48 32 88.9 0 146 3 105 152 MBO7181535.1 hypothetical protein [Kiritimatiellia bacterium] diamond 144 41.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29557605 29557605 PRJNA811237_S_NODE_6390_length_292_cov_1.847737_g6150_i0 PRJNA811237 6390 292 1.847737 5.39539204 PVC group 1783257 Bacteria Bacteria 88.6 5.36e-18   NR MDD3604728.1 2212473 g6150 i0 50 5.82534246575342 82 41 84.2 0 43 288 206 287 MDD3604728.1 AMP-binding protein [Kiritimatiellia bacterium] diamond 1701 88.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32045825 32045825 PRJNA811237_S_NODE_12238_length_225_cov_3.477273_g11998_i0 PRJNA811237 12238 225 3.477273 7.82386425 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 106 1.0799999999999999e-24   NR MBQ9345471.1 2212473 g11998 i0 66.2 0.986666666666667 74 25 98.7 0 223 2 160 233 MBQ9345471.1 glutamine--tRNA ligase/YqeY domain fusion protein [Kiritimatiellia bacterium] diamond 222 106 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;