contig_metadata
8 rows where bioproject = "PRJNA811237" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17387141 | 17387141 | PRJNA811237_S_NODE_22714_length_180_cov_1.557252_g22474_i0 | PRJNA811237 | 22714 | 180 | 1.557252 | 2.8030536 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 209 | 8.56e-50 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g22474 | i0 | 90.123 | 99.2111111111111 | 162 | 14 | 89 | 2 | 1 | 161 | 2314459 | 2314619 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 17858 | 209 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 23761402 | 23761402 | PRJNA811237_S_NODE_5079_length_323_cov_0.930657_g4839_i0 | PRJNA811237 | 5079 | 323 | 0.930657 | 3.00602211 | FCB group | 1783270 | Bacteria | Bacteria | 185 | 7.509999999999998e-55 | NR | HEY9229717.1 | 2026741 | g4839 | i0 | 76.6 | 9.96594427244582 | 107 | 25 | 99.4 | 0 | 322 | 2 | 76 | 182 | HEY9229717.1 NADP-dependent isocitrate dehydrogenase [Gemmatimonadaceae bacterium] | diamond | 3219 | 185 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 26959155 | 26959155 | PRJNA811237_S_NODE_5362_length_315_cov_1.270677_g5122_i0 | PRJNA811237 | 5362 | 315 | 1.270677 | 4.00263255 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 48.9 | 5.76e-4 | NR | MEO5509184.1 | 2910168 | g5122 | i0 | 31.7 | 0.990476190476191 | 104 | 68 | 97.1 | 2 | 2 | 307 | 480 | 582 | MEO5509184.1 acyl-CoA dehydrogenase [Longimicrobiales bacterium] | diamond | 312 | 48.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 27812596 | 27812596 | PRJNA811237_S_NODE_17624_length_198_cov_2.140940_g17384_i0 | PRJNA811237 | 17624 | 198 | 2.14094 | 4.2390612 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 57.4 | 1.38e-7 | NR | MCC7001122.1 | 2026741 | g17384 | i0 | 63.9 | 1.62121212121212 | 36 | 13 | 54.5 | 0 | 110 | 3 | 2 | 37 | MCC7001122.1 aldehyde dehydrogenase family protein [Gemmatimonadaceae bacterium] | diamond | 321 | 57.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30157625 | 30157625 | PRJNA811237_S_NODE_32932_length_163_cov_0.894737_g32692_i0 | PRJNA811237 | 32932 | 163 | 0.894737 | 1.45842131 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 92.4 | 4e-20 | NR | KPK82456.1 | 1703359 | g32692 | i0 | 87 | 73.5460122699387 | 54 | 7 | 99.4 | 0 | 1 | 162 | 434 | 487 | KPK82456.1 MAG: phosphoribosylformylglycinamidine synthase [Gemmatimonas sp. SM23_52] | diamond | 11988 | 92.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. SM23_52 | |
| 30180548 | 30180548 | PRJNA811237_S_NODE_34472_length_162_cov_0.902655_g34232_i0 | PRJNA811237 | 34472 | 162 | 0.902655 | 1.4623011 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 61.6 | 1.46e-9 | NR | MEO5903208.1 | 2026741 | g34232 | i0 | 56 | 9.2962962962963 | 50 | 22 | 92.6 | 0 | 154 | 5 | 191 | 240 | MEO5903208.1 ceramidase domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 1506 | 61.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30844235 | 30844235 | PRJNA811237_S_NODE_27074_length_168_cov_0.857143_g26834_i0 | PRJNA811237 | 27074 | 168 | 0.857143 | 1.44000024 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 40.4 | 0.0208 | NR | HEX8831295.1 | 2029185 | g26834 | i0 | 48.7 | 0.696428571428571 | 39 | 19 | 67.9 | 1 | 45 | 158 | 20 | 58 | HEX8831295.1 hypothetical protein [Longimicrobium sp.] | diamond | 117 | 40.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 32615077 | 32615077 | PRJNA811237_S_NODE_6200_length_296_cov_1.651822_g5960_i0 | PRJNA811237 | 6200 | 296 | 1.651822 | 4.88939312 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 43.5 | 0.037 | NR | HEY6853401.1 | 2448054 | g5960 | i0 | 41.5 | 0.658783783783784 | 65 | 35 | 62.8 | 1 | 282 | 97 | 175 | 239 | HEY6853401.1 response regulator [Gemmatimonadales bacterium] | diamond | 195 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;