RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA811237" and tax_phylum = "Candidatus Hydrothermota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrothermota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA811237 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28159881 28159881 PRJNA811237_S_NODE_23945_length_176_cov_2.000000_g23705_i0 PRJNA811237 23945 176 2 3.52 Candidatus Hydrothermia bacterium 3014280 Bacteria Bacteria 70.1 3.15e-12   NR MDT7879665.1 3014280 g23705 i0 56.9 4.94318181818182 58 23 98.9 1 1 174 289 344 MDT7879665.1 ornithine--oxo-acid transaminase [Candidatus Hydrothermia bacterium] diamond 870 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Hydrothermota Candidatus Hydrothermia       Candidatus Hydrothermia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;