RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA811237", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA811237 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17387099 17387099 PRJNA811237_S_NODE_11134_length_233_cov_1.663043_g10894_i0 PRJNA811237 11134 233 1.663043 3.87489019 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 112 5.130000000000001e-27   NR MFA5507019.1 3107663 g10894 i0 71 1.81545064377682 69 20 88.8 0 25 231 81 149 MFA5507019.1 phosphoenolpyruvate carboxykinase (ATP) [Vulcanimicrobiota bacterium] diamond 423 112 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
31887453 31887453 PRJNA811237_S_NODE_33877_length_162_cov_0.902655_g33637_i0 PRJNA811237 33877 162 0.902655 1.4623011 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 95.5 2.9400000000000003e-21   NR MFA5507019.1 3107663 g33637 i0 77.4 4.90740740740741 53 12 98.1 0 160 2 313 365 MFA5507019.1 phosphoenolpyruvate carboxykinase (ATP) [Vulcanimicrobiota bacterium] diamond 795 95.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;