contig_metadata
26 rows where bioproject = "PRJNA811237", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2084499 | 2084499 | PRJNA811237_S_NODE_27622_length_167_cov_0.864407_g27382_i0 | PRJNA811237 | 27622 | 167 | 0.864407 | 1.44355969 | Terrimicrobium | 1649503 | Bacteria | Bacteria | 70.5 | 2.18e-12 | NR | WP_075080344.1 | 690879 | g27382 | i0 | 66.7 | 3.44910179640719 | 48 | 16 | 86.2 | 0 | 145 | 2 | 609 | 656 | WP_075080344.1 glycoside hydrolase family 9 protein [Terrimicrobium sacchariphilum] | diamond | 576 | 70.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Terrimicrobiia | Terrimicrobiales | Terrimicrobiaceae | Terrimicrobium | Terrimicrobium sacchariphilum | |
| 2499071 | 2499071 | PRJNA811237_S_NODE_15002_length_210_cov_0.950311_g14762_i0 | PRJNA811237 | 15002 | 210 | 0.950311 | 1.9956531 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 109 | 8.680000000000001e-26 | NR | MDX2110087.1 | 2026799 | g14762 | i0 | 79.7 | 6.94285714285714 | 69 | 14 | 98.6 | 0 | 207 | 1 | 371 | 439 | MDX2110087.1 transketolase [Verrucomicrobiota bacterium] | diamond | 1458 | 109 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 26610887 | 26610887 | PRJNA811237_S_NODE_561_length_908_cov_2.703143_g387_i0 | PRJNA811237 | 561 | 908 | 2.703143 | 24.54453844 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 175 | 1.78e-46 | NR | HYG84357.1 | 2499141 | g387 | i0 | 54.5 | 0.631057268722467 | 191 | 81 | 61.8 | 4 | 35 | 595 | 90 | 278 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 573 | 175 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 26927666 | 26927666 | PRJNA811237_S_NODE_13762_length_216_cov_1.934132_g13522_i0 | PRJNA811237 | 13762 | 216 | 1.934132 | 4.17772512 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 60.5 | 1.42e-8 | NR | MBP7951221.1 | 2026801 | g13522 | i0 | 41.7 | 2.44444444444444 | 60 | 35 | 83.3 | 0 | 212 | 33 | 409 | 468 | MBP7951221.1 UTP--glucose-1-phosphate uridylyltransferase [Verrucomicrobiales bacterium] | diamond | 528 | 60.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 28380690 | 28380690 | PRJNA811237_S_NODE_4386_length_346_cov_1.101010_g4146_i0 | PRJNA811237 | 4386 | 346 | 1.10101 | 3.8094946 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 87.8 | 8.44e-18 | NR | MCU0750558.1 | 2562705 | g4146 | i0 | 69.8 | 2.17630057803468 | 63 | 19 | 54.6 | 0 | 3 | 191 | 293 | 355 | MCU0750558.1 alkene reductase [Akkermansiaceae bacterium] | diamond | 753 | 87.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 28475478 | 28475478 | PRJNA811237_S_NODE_9486_length_248_cov_1.537688_g9246_i0 | PRJNA811237 | 9486 | 248 | 1.537688 | 3.81346624 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 57.8 | 1.98e-7 | NR | HYG84357.1 | 2499141 | g9246 | i0 | 44.9 | 0.834677419354839 | 69 | 38 | 83.5 | 0 | 223 | 17 | 194 | 262 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 207 | 57.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 28507074 | 28507074 | PRJNA811237_S_NODE_4147_length_357_cov_1.788961_g3907_i0 | PRJNA811237 | 4147 | 357 | 1.788961 | 6.38659077 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 80.1 | 1.1e-14 | NR | HYG84357.1 | 2499141 | g3907 | i0 | 39.8 | 1.89915966386555 | 113 | 66 | 93.3 | 1 | 1 | 333 | 412 | 524 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 678 | 80.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 28728053 | 28728053 | PRJNA811237_S_NODE_36147_length_158_cov_2.165138_g35907_i0 | PRJNA811237 | 36147 | 158 | 2.165138 | 3.42091804 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 51.2 | 8.67e-7 | NR | MBV8376154.1 | 2026799 | g35907 | i0 | 55.6 | 1.5379746835443 | 45 | 20 | 85.4 | 0 | 136 | 2 | 4 | 48 | MBV8376154.1 PUR family DNA/RNA-binding protein [Verrucomicrobiota bacterium] | diamond | 243 | 51.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29233346 | 29233346 | PRJNA811237_S_NODE_6769_length_285_cov_1.652542_g6529_i0 | PRJNA811237 | 6769 | 285 | 1.652542 | 4.7097447 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 68.9 | 3.67e-11 | NR | HYG84357.1 | 2499141 | g6529 | i0 | 46.3 | 1.68421052631579 | 80 | 43 | 84.2 | 0 | 251 | 12 | 338 | 417 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 480 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 29264603 | 29264603 | PRJNA811237_S_NODE_29169_length_166_cov_0.871795_g28929_i0 | PRJNA811237 | 29169 | 166 | 0.871795 | 1.4471797 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 48.1 | 1.64e-4 | NR | HUA58568.1 | 2499141 | g28929 | i0 | 41.2 | 4.2289156626506 | 51 | 29 | 90.4 | 1 | 4 | 153 | 6 | 56 | HUA58568.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Verrucomicrobiia bacterium] | diamond | 702 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 29273400 | 29273400 | PRJNA811237_S_NODE_8569_length_258_cov_1.602871_g8329_i0 | PRJNA811237 | 8569 | 258 | 1.602871 | 4.13540718 | Bacteria | 2 | Bacteria | Bacteria | 50.1 | 1.15e-4 | NR | MEL0117385.1 | 2026771 | g8329 | i0 | 31.3 | 4.84883720930233 | 83 | 55 | 96.5 | 1 | 253 | 5 | 392 | 472 | MEL0117385.1 hypothetical protein [Opitutia bacterium] | diamond | 1251 | 50.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 29422428 | 29422428 | PRJNA811237_S_NODE_14389_length_213_cov_1.079268_g14149_i0 | PRJNA811237 | 14389 | 213 | 1.079268 | 2.29884084 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 45.1 | 0.0038 | NR | HYG84357.1 | 2499141 | g14149 | i0 | 43.9 | 0.802816901408451 | 57 | 32 | 80.3 | 0 | 209 | 39 | 435 | 491 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 171 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 29453852 | 29453852 | PRJNA811237_S_NODE_29450_length_166_cov_0.871795_g29210_i0 | PRJNA811237 | 29450 | 166 | 0.871795 | 1.4471797 | Akkermansia sp. | 1872421 | Bacteria | Bacteria | 47.4 | 2.99e-4 | NR | MDO4411406.1 | 1872421 | g29210 | i0 | 51.9 | 0.975903614457831 | 54 | 26 | 97.6 | 0 | 164 | 3 | 531 | 584 | MDO4411406.1 DNA topoisomerase 3 [Akkermansia sp.] | diamond | 162 | 47.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia sp. | |
| 29548725 | 29548725 | PRJNA811237_S_NODE_12610_length_223_cov_1.465517_g12370_i0 | PRJNA811237 | 12610 | 223 | 1.465517 | 3.26810291 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 92.8 | 2.04e-20 | NR | RYD65414.1 | 2026800 | g12370 | i0 | 67.1 | 0.982062780269058 | 73 | 22 | 98.2 | 1 | 222 | 4 | 169 | 239 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 219 | 92.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 30307510 | 30307510 | PRJNA811237_S_NODE_20272_length_188_cov_1.618705_g20032_i0 | PRJNA811237 | 20272 | 188 | 1.618705 | 3.0431654 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 63.5 | 8.12e-10 | NR | MBI2513926.1 | 2026771 | g20032 | i0 | 53.7 | 1.83510638297872 | 54 | 25 | 86.2 | 0 | 162 | 1 | 9 | 62 | MBI2513926.1 YHYH protein [Opitutia bacterium] | diamond | 345 | 63.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 30654451 | 30654451 | PRJNA811237_S_NODE_35153_length_161_cov_0.910714_g34913_i0 | PRJNA811237 | 35153 | 161 | 0.910714 | 1.46624954 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 65.9 | 8.5e-11 | NR | MEY2545004.1 | 2026799 | g34913 | i0 | 63.5 | 2.90683229813665 | 52 | 19 | 96.9 | 0 | 161 | 6 | 735 | 786 | MEY2545004.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 468 | 65.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31074201 | 31074201 | PRJNA811237_S_NODE_9055_length_253_cov_1.495098_g8815_i0 | PRJNA811237 | 9055 | 253 | 1.495098 | 3.78259794 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 68.2 | 3.5e-11 | NR | MDE1170842.1 | 72225 | g8815 | i0 | 54.7 | 4.80237154150198 | 64 | 28 | 75.9 | 1 | 62 | 253 | 7 | 69 | MDE1170842.1 2-enoyl thioester reductase domain-containing protein [Verrucomicrobium sp.] | diamond | 1215 | 68.6 | 0.994169096209913 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium sp. | |
| 31159704 | 31159704 | PRJNA811237_S_NODE_26275_length_170_cov_1.223140_g26035_i0 | PRJNA811237 | 26275 | 170 | 1.22314 | 2.079338 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 46.6 | 6.05e-4 | NR | HYV20656.1 | 2499141 | g26035 | i0 | 51.2 | 0.723529411764706 | 41 | 16 | 68.8 | 2 | 49 | 165 | 118 | 156 | HYV20656.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 123 | 46.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 31602969 | 31602969 | PRJNA811237_S_NODE_32416_length_163_cov_1.166667_g32176_i0 | PRJNA811237 | 32416 | 163 | 1.166667 | 1.90166721 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 41.6 | 0.03 | NR | MBJ7392643.1 | 2201154 | g32176 | i0 | 40.4 | 0.957055214723926 | 52 | 27 | 93.9 | 2 | 9 | 161 | 10 | 58 | MBJ7392643.1 hypothetical protein [Chthoniobacterales bacterium] | diamond | 156 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 31855813 | 31855813 | PRJNA811237_S_NODE_19537_length_191_cov_1.077465_g19297_i0 | PRJNA811237 | 19537 | 191 | 1.077465 | 2.05795815 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 67.8 | 2.7e-11 | NR | HZC36900.1 | 2201154 | g19297 | i0 | 58.1 | 6.87958115183246 | 62 | 26 | 97.4 | 0 | 3 | 188 | 86 | 147 | HZC36900.1 sugar porter family MFS transporter [Chthoniobacterales bacterium] | diamond | 1314 | 67.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 31887456 | 31887456 | PRJNA811237_S_NODE_5177_length_320_cov_1.059041_g4937_i0 | PRJNA811237 | 5177 | 320 | 1.059041 | 3.3889312 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 63.5 | 4.7e-9 | NR | MEY4916642.1 | 2026799 | g4937 | i0 | 45.6 | 0.740625 | 79 | 39 | 73.1 | 3 | 17 | 250 | 692 | 767 | MEY4916642.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 237 | 63.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32393825 | 32393825 | PRJNA811237_S_NODE_26799_length_168_cov_1.924370_g26559_i0 | PRJNA811237 | 26799 | 168 | 1.92437 | 3.2329416 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 41.6 | 0.0327 | NR | NNC90263.1 | 2562705 | g26559 | i0 | 44 | 1.78571428571429 | 50 | 27 | 87.5 | 1 | 15 | 161 | 154 | 203 | NNC90263.1 TolC family protein [Akkermansiaceae bacterium] | diamond | 300 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 32709382 | 32709382 | PRJNA811237_S_NODE_11780_length_228_cov_3.217877_g11540_i0 | PRJNA811237 | 11780 | 228 | 3.217877 | 7.33675956 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 130 | 9.06e-35 | NR | RYD65414.1 | 2026800 | g11540 | i0 | 77.3 | 0.986842105263158 | 75 | 17 | 98.7 | 0 | 3 | 227 | 237 | 311 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 225 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32741106 | 32741106 | PRJNA811237_S_NODE_28260_length_167_cov_0.864407_g28020_i0 | PRJNA811237 | 28260 | 167 | 0.864407 | 1.44355969 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 50.1 | 3.42e-5 | NR | MEO5715941.1 | 1962973 | g28020 | i0 | 46.2 | 1.83233532934132 | 52 | 28 | 93.4 | 0 | 157 | 2 | 88 | 139 | MEO5715941.1 MFS transporter [Luteolibacter sp.] | diamond | 306 | 50.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 32866854 | 32866854 | PRJNA811237_S_NODE_17500_length_199_cov_1.140000_g17260_i0 | PRJNA811237 | 17500 | 199 | 1.14 | 2.2686 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 42.7 | 0.0202 | NR | MFL6529243.1 | 2201154 | g17260 | i0 | 36.4 | 1.32663316582915 | 44 | 28 | 66.3 | 0 | 3 | 134 | 192 | 235 | MFL6529243.1 chromate efflux transporter [Chthoniobacterales bacterium] | diamond | 264 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 32898251 | 32898251 | PRJNA811237_S_NODE_6720_length_286_cov_1.468354_g6480_i0 | PRJNA811237 | 6720 | 286 | 1.468354 | 4.19949244 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 56.2 | 1.05e-6 | NR | MBT3540390.1 | 2026771 | g6480 | i0 | 28.7 | 3.9965034965035 | 94 | 65 | 98.6 | 1 | 3 | 284 | 283 | 374 | MBT3540390.1 hypothetical protein [Opitutia bacterium] | diamond | 1143 | 56.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;