RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA811237", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA811237 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30347936 30347936 PRJNA811237_S_NODE_12912_length_221_cov_2.116279_g12672_i0 PRJNA811237 12912 221 2.116279 4.67697659 Bacteria 2 Bacteria Bacteria 70.5 4.75e-12   NR OIO38185.1 1805290 g12672 i0 53.4 1.57466063348416 58 27 78.7 0 198 25 1016 1073 OIO38185.1 MAG: hypothetical protein AUJ71_03705 [Candidatus Omnitrophica bacterium CG1_02_49_16] diamond 348 70.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG1_02_49_16
31295327 31295327 PRJNA811237_S_NODE_13175_length_220_cov_1.192982_g12935_i0 PRJNA811237 13175 220 1.192982 2.6245604 Bacteria 2 Bacteria Bacteria 76.6 3.23e-14   NR OIO38185.1 1805290 g12935 i0 46.5 3.55909090909091 71 36 94.1 1 8 214 1015 1085 OIO38185.1 MAG: hypothetical protein AUJ71_03705 [Candidatus Omnitrophica bacterium CG1_02_49_16] diamond 783 76.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG1_02_49_16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;