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contig_metadata

27 rows where bioproject = "PRJNA811237", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 27 ✖

tax_clade 1

  • Bacteria candidate phyla · 27 ✖

bioproject 1

  • PRJNA811237 · 27 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5051604 5051604 PRJNA811237_S_NODE_10724_length_236_cov_2.668449_g10484_i0 PRJNA811237 10724 236 2.668449 6.29753964 Bacteria 2 Bacteria Bacteria 112 4.15e-27   NR KKP96059.1 1619081 g10484 i0 60.3 5.86016949152542 78 30 99.2 1 236 3 368 444 KKP96059.1 MAG: Deoxyribodipyrimidine photo-lyase [candidate division TM6 bacterium GW2011_GWF2_36_131] diamond 1383 112 1 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium GW2011_GWF2_36_131
26705804 26705804 PRJNA811237_S_NODE_28161_length_167_cov_0.864407_g27921_i0 PRJNA811237 28161 167 0.864407 1.44355969 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.8 3.16e-7   NR MFA6270074.1 2053589 g27921 i0 59.6 4.04191616766467 47 15 82.6 2 162 25 585 628 MFA6270074.1 carbohydrate-binding protein [Candidatus Paceibacterota bacterium] diamond 675 55.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26927672 26927672 PRJNA811237_S_NODE_22142_length_182_cov_1.285714_g21902_i0 PRJNA811237 22142 182 1.285714 2.33999948 Patescibacteria group bacterium 2052139 Bacteria Bacteria 42 0.0315   NR TAK05327.1 2052139 g21902 i0 47.8 0.758241758241758 46 24 75.8 0 44 181 492 537 TAK05327.1 MAG: hypothetical protein EPO33_05175 [Patescibacteria group bacterium] diamond 138 42 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26927678 26927678 PRJNA811237_S_NODE_28562_length_166_cov_1.307692_g28322_i0 PRJNA811237 28562 166 1.307692 2.17076872 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 48.9 8.74e-5   NR MCK5016179.1 2735830 g28322 i0 35.7 1.01204819277108 56 34 97.6 1 162 1 265 320 MCK5016179.1 hypothetical protein [Candidatus Peribacteraceae bacterium] diamond 168 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
27022601 27022601 PRJNA811237_S_NODE_15142_length_209_cov_1.275000_g14902_i0 PRJNA811237 15142 209 1.275 2.66475 Minisyncoccota bacterium 2053589 Bacteria Bacteria 42 0.0111   NR MDD2913601.1 2053589 g14902 i0 57.1 1.03349282296651 28 12 40.2 0 200 117 21 48 MDD2913601.1 thioredoxin domain-containing protein [Candidatus Paceibacterota bacterium] diamond 216 42 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27307270 27307270 PRJNA811237_S_NODE_25503_length_172_cov_1.243902_g25263_i0 PRJNA811237 25503 172 1.243902 2.13951144 Minisyncoccota bacterium 2053589 Bacteria Bacteria 52.8 4.2e-6   NR MEZ0208671.1 2053589 g25263 i0 45.5 0.959302325581395 55 30 95.9 0 8 172 220 274 MEZ0208671.1 reverse transcriptase domain-containing protein [Candidatus Paceibacterota bacterium] diamond 165 52.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27559616 27559616 PRJNA811237_S_NODE_9984_length_243_cov_1.453608_g9744_i0 PRJNA811237 9984 243 1.453608 3.53226744 Patescibacteria group bacterium 2052139 Bacteria Bacteria 131 1.32e-34   NR MCL4419852.1 2052139 g9744 i0 82.5 0.987654320987654 80 14 98.8 0 2 241 316 395 MCL4419852.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase [Patescibacteria group bacterium] diamond 240 131 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27591560 27591560 PRJNA811237_S_NODE_34984_length_161_cov_1.223214_g34744_i0 PRJNA811237 34984 161 1.223214 1.96937454 Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_54_23 1802397 Bacteria Bacteria 62 1.92e-9   NR OGL78705.1 1802397 g34744 i0 50.9 0.987577639751553 53 26 98.8 0 3 161 61 113 OGL78705.1 MAG: deoxyribodipyrimidine photolyase [Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_54_23] diamond 159 62 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_54_23
27875434 27875434 PRJNA811237_S_NODE_35125_length_161_cov_0.910714_g34885_i0 PRJNA811237 35125 161 0.910714 1.46624954 Candidatus Spechtbacteria bacterium 2750079 Bacteria Bacteria 65.1 8.72e-11   NR MBI2463034.1 2750079 g34885 i0 64.6 0.894409937888199 48 17 89.4 0 18 161 122 169 MBI2463034.1 NUDIX domain-containing protein [Candidatus Spechtbacteria bacterium] diamond 144 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Spechtiibacteriota         Candidatus Spechtbacteria bacterium
28159881 28159881 PRJNA811237_S_NODE_23945_length_176_cov_2.000000_g23705_i0 PRJNA811237 23945 176 2 3.52 Candidatus Hydrothermia bacterium 3014280 Bacteria Bacteria 70.1 3.15e-12   NR MDT7879665.1 3014280 g23705 i0 56.9 4.94318181818182 58 23 98.9 1 1 174 289 344 MDT7879665.1 ornithine--oxo-acid transaminase [Candidatus Hydrothermia bacterium] diamond 870 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Hydrothermota Candidatus Hydrothermia       Candidatus Hydrothermia bacterium
28484306 28484306 PRJNA811237_S_NODE_1826_length_533_cov_1.561983_g1587_i0 PRJNA811237 1826 533 1.561983 8.32536939 Bacillati 1783272 Bacteria Bacteria 55.5 1.05e-5   NR MYA58282.1 2026781 g1587 i0 36.8 5.24015009380863 95 57 52.9 2 448 167 127 219 MYA58282.1 aquaporin [Candidatus Poribacteria bacterium] diamond 2793 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
28664936 28664936 PRJNA811237_S_NODE_19747_length_190_cov_1.446809_g19507_i0 PRJNA811237 19747 190 1.446809 2.7489371 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 41.6 0.047   NR MFC1841582.1 2030827 g19507 i0 63.3 0.473684210526316 30 11 47.4 0 190 101 278 307 MFC1841582.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Dependentiae bacterium] diamond 90 41.6 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
28664938 28664938 PRJNA811237_S_NODE_20767_length_187_cov_0.956522_g20527_i0 PRJNA811237 20767 187 0.956522 1.78869614 Patescibacteria group bacterium 2052139 Bacteria Bacteria 44.7 0.00376   NR MBU0974672.1 2052139 g20527 i0 42.3 0.834224598930481 52 29 81.8 1 175 23 217 268 MBU0974672.1 hypothetical protein [Patescibacteria group bacterium] diamond 156 44.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28949289 28949289 PRJNA811237_S_NODE_8548_length_258_cov_2.244019_g8308_i0 PRJNA811237 8548 258 2.244019 5.78956902 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 44.7 0.00969   NR MBI5166485.1 2072417 g8308 i0 37.8 0.953488372093023 82 44 93 2 4 243 717 793 MBI5166485.1 penicillin acylase family protein [Candidatus Methylomirabilota bacterium] diamond 246 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29738123 29738123 PRJNA811237_S_NODE_34310_length_162_cov_0.902655_g34070_i0 PRJNA811237 34310 162 0.902655 1.4623011 Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_ 2053542 Bacteria Bacteria 45.4 0.00135   NR OGE30245.1 1797768 g34070 i0 41.5 0.981481481481482 53 30 96.3 1 2 157 246 298 OGE30245.1 MAG: hypothetical protein A3C59_04665 [Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13] diamond 159 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13
30054077 30054077 PRJNA811237_S_NODE_27271_length_167_cov_1.516949_g27031_i0 PRJNA811237 27271 167 1.516949 2.53330483 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 41.2 0.0443   NR MBI1925016.1 2026781 g27031 i0 37.3 0.916167664670659 51 27 82.6 1 29 166 160 210 MBI1925016.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 153 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30402269 30402269 PRJNA811237_S_NODE_9153_length_252_cov_1.256158_g8913_i0 PRJNA811237 9153 252 1.256158 3.16551816 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 55.8 1.01e-6   NR HWN97259.1 2072417 g8913 i0 43.2 0.880952380952381 74 41 86.9 1 17 235 976 1049 HWN97259.1 serine/threonine-protein kinase [Candidatus Methylomirabilota bacterium] diamond 222 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30433760 30433760 PRJNA811237_S_NODE_30873_length_164_cov_2.156522_g30633_i0 PRJNA811237 30873 164 2.156522 3.53669608 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 46.2 7.63e-4   NR MEN9338437.1 2762014 g30633 i0 46.8 0.859756097560976 47 21 78.7 1 26 154 376 422 MEN9338437.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 141 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30528102 30528102 PRJNA811237_S_NODE_15873_length_206_cov_0.974522_g15633_i0 PRJNA811237 15873 206 0.974522 2.00751532 Patescibacteria group bacterium 2052139 Bacteria Bacteria 42 0.043   NR MBU1148725.1 2052139 g15633 i0 36 0.728155339805825 50 27 72.8 1 202 53 346 390 MBU1148725.1 DUF2079 domain-containing protein [Patescibacteria group bacterium] diamond 150 42 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31349934 31349934 PRJNA811237_S_NODE_32256_length_163_cov_1.342105_g32016_i0 PRJNA811237 32256 163 1.342105 2.18763115 candidate division WWE3 bacterium 2053526 Bacteria Bacteria 41.6 0.0143   NR NTV30820.1 2053526 g32016 i0 47.6 0.773006134969325 42 22 77.3 0 32 157 15 56 NTV30820.1 hypothetical protein [candidate division WWE3 bacterium] diamond 126 41.6 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium
31959585 31959585 PRJNA811237_S_NODE_34117_length_162_cov_0.902655_g33877_i0 PRJNA811237 34117 162 0.902655 1.4623011 root 1 Root_unresolved Root_unresolved 48.5 1e-4   NR OHA59211.1 1802436 g33877 i0 46.9 8.38888888888889 49 26 90.7 0 159 13 74 122 OHA59211.1 MAG: bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase, partial [Candidatus Vogelbacteria bacterium RIFOXYB1_FULL_42_16] diamond 1359 48.9 0.991820040899796 Bacteria Bacteria candidate phyla   Candidatus Vogeliibacteriota         Candidatus Vogelbacteria bacterium RIFOXYB1_FULL_42_16
31982317 31982317 PRJNA811237_S_NODE_19298_length_192_cov_1.069930_g19058_i0 PRJNA811237 19298 192 1.06993 2.0542656 Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_54_23 1802397 Bacteria Bacteria 71.2 1.67e-12   NR OGL78705.1 1802397 g19058 i0 50.8 0.984375 63 31 98.4 0 4 192 59 121 OGL78705.1 MAG: deoxyribodipyrimidine photolyase [Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_54_23] diamond 189 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_54_23
32014096 32014096 PRJNA811237_S_NODE_27578_length_167_cov_0.864407_g27338_i0 PRJNA811237 27578 167 0.864407 1.44355969 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 45.8 0.00108   NR MFA4815524.1 2044595 g27338 i0 48.1 2.94610778443114 54 23 97 2 6 167 245 293 MFA4815524.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Altimarinota bacterium] diamond 492 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32109012 32109012 PRJNA811237_S_NODE_17638_length_198_cov_1.966443_g17398_i0 PRJNA811237 17638 198 1.966443 3.89355714 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 83.2 1.1e-16   NR HEU4334507.1 2212470 g17398 i0 70.2 0.863636363636364 57 17 86.4 0 171 1 1 57 HEU4334507.1 transketolase [Candidatus Eiseniibacteriota bacterium] diamond 171 83.2 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
32552286 32552286 PRJNA811237_S_NODE_34139_length_162_cov_0.902655_g33899_i0 PRJNA811237 34139 162 0.902655 1.4623011 Patescibacteria group bacterium 2052139 Bacteria Bacteria 96.3 1.6400000000000002e-21   NR MCL4419431.1 2052139 g33899 i0 88.9 1 54 5 98.1 1 2 160 520 573 MCL4419431.1 hypothetical protein [Patescibacteria group bacterium] diamond 162 96.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32741093 32741093 PRJNA811237_S_NODE_10120_length_242_cov_1.056995_g9880_i0 PRJNA811237 10120 242 1.056995 2.5579279 Patescibacteria group bacterium 2052139 Bacteria Bacteria 43.1 0.0261   NR MES2930748.1 2052139 g9880 i0 58.1 0.384297520661157 31 13 38.4 0 242 150 382 412 MES2930748.1 NADP-dependent isocitrate dehydrogenase [Patescibacteria group bacterium] diamond 93 43.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32875655 32875655 PRJNA811237_S_NODE_33100_length_163_cov_0.894737_g32860_i0 PRJNA811237 33100 163 0.894737 1.45842131 Pseudomonadati 3379134 Bacteria Bacteria 79.3 9.89e-16   NR MBN1224910.1 2052149 g32860 i0 67.3 1.89570552147239 52 17 95.7 0 7 162 289 340 MBN1224910.1 phosphoserine transaminase [Candidatus Aminicenantes bacterium] diamond 309 79.3 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;