RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA811237", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA811237 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28949289 28949289 PRJNA811237_S_NODE_8548_length_258_cov_2.244019_g8308_i0 PRJNA811237 8548 258 2.244019 5.78956902 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 44.7 0.00969   NR MBI5166485.1 2072417 g8308 i0 37.8 0.953488372093023 82 44 93 2 4 243 717 793 MBI5166485.1 penicillin acylase family protein [Candidatus Methylomirabilota bacterium] diamond 246 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30402269 30402269 PRJNA811237_S_NODE_9153_length_252_cov_1.256158_g8913_i0 PRJNA811237 9153 252 1.256158 3.16551816 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 55.8 1.01e-6   NR HWN97259.1 2072417 g8913 i0 43.2 0.880952380952381 74 41 86.9 1 17 235 976 1049 HWN97259.1 serine/threonine-protein kinase [Candidatus Methylomirabilota bacterium] diamond 222 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;