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contig_metadata

12 rows where bioproject = "PRJNA811237" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 12 ✖

bioproject 1

  • PRJNA811237 · 12 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5912250 5912250 PRJNA811237_S_NODE_625_length_872_cov_3.884569_g447_i0 PRJNA811237 625 872 3.884569 33.87344168 Thecamonas trahens 529818 Root_unresolved Root_unresolved 121 2.38e-22   NTclustered gi|923136453|ref|XM_013906238.1| 461836 g447 i0 81.818 0.243119266055046 143 26 16 0 138 280 148 290 Thecamonas trahens ATCC 50062 50S ribosomal protein L36e (AMSG_01644), partial mRNA blastn 212 121 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16111243 16111243 PRJNA811237_S_NODE_2653_length_445_cov_4.967172_g2413_i0 PRJNA811237 2653 445 4.967172 22.1039154 Karpovia croatica 2925417 Root_unresolved Root_unresolved 102 4.22e-17   NTclustered gi|2206682173|gb|OM966646.1| 2925417 g2413 i0 87.64 13.7101123595506 89 9 20 2 38 125 6107 6020 Karpovia croatica strain CRO19P6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6101 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Karpovia Karpovia croatica
24175214 24175214 PRJNA811237_S_NODE_13739_length_216_cov_2.682635_g13499_i0 PRJNA811237 13739 216 2.682635 5.7944916 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 259 1.05e-64   NTclustered gi|923124074|ref|XM_013900052.1| 461836 g13499 i0 89.048 93.8842592592593 210 21 97 2 1 209 209 1 Thecamonas trahens ATCC 50062 actin-3 (AMSG_08145), partial mRNA blastn 20279 259 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
25035259 25035259 PRJNA811237_S_NODE_28540_length_166_cov_1.307692_g28300_i0 PRJNA811237 28540 166 1.307692 2.17076872 Thecamonas trahens 529818 Root_unresolved Root_unresolved 139 1.04e-28   NTclustered gi|923118331|ref|XM_013897188.1| 461836 g28300 i0 84.028 47.3192771084337 144 23 87 0 23 166 169 312 Thecamonas trahens ATCC 50062 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (AMSG_11497), partial mRNA blastn 7855 139 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27884314 27884314 PRJNA811237_S_NODE_5925_length_302_cov_1.292490_g5685_i0 PRJNA811237 5925 302 1.29249 3.9033198 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 100 1.35e-23   NR XP_013762452.1 461836 g5685 i0 45.5 2.99006622516556 101 54 99.3 1 301 2 106 206 XP_013762452.1 eukaryotic translation initiation factor 4E-1 [Thecamonas trahens ATCC 50062] diamond 903 101 0.99009900990099 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28917212 28917212 PRJNA811237_S_NODE_25488_length_172_cov_1.243902_g25248_i0 PRJNA811237 25488 172 1.243902 2.13951144 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 74.7 7.58e-14   NR XP_013754538.1 461836 g25248 i0 57.9 1.98837209302326 57 24 99.4 0 1 171 138 194 XP_013754538.1 dihydrolipoyl dehydrogenase [Thecamonas trahens ATCC 50062] diamond 342 74.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29801403 29801403 PRJNA811237_S_NODE_13351_length_219_cov_1.082353_g13111_i0 PRJNA811237 13351 219 1.082353 2.37035307 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 62 4.12e-9   NR XP_013753299.1 461836 g13111 i0 47.1 0.931506849315068 68 36 93.2 0 11 214 240 307 XP_013753299.1 translation initiation factor eIF-2B subunit beta [Thecamonas trahens ATCC 50062] diamond 204 62 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29810224 29810224 PRJNA811237_S_NODE_11331_length_232_cov_0.901639_g11091_i0 PRJNA811237 11331 232 0.901639 2.09180248 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 4.37e-26   NR XP_013761100.1 461836 g11091 i0 68.8 1.99137931034483 77 24 99.6 0 232 2 199 275 XP_013761100.1 aldehyde dehydrogenase [Thecamonas trahens ATCC 50062] diamond 462 110 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30085740 30085740 PRJNA811237_S_NODE_28632_length_166_cov_1.222222_g28392_i0 PRJNA811237 28632 166 1.222222 2.02888852 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 65.5 1.27e-10   NR XP_013754996.1 461836 g28392 i0 71.4 4.01204819277108 42 12 75.9 0 41 166 547 588 XP_013754996.1 vacuolar proton translocating ATPase 100 kDa subunit [Thecamonas trahens ATCC 50062] diamond 666 65.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31508116 31508116 PRJNA811237_S_NODE_11896_length_228_cov_1.055866_g11656_i0 PRJNA811237 11896 228 1.055866 2.40737448 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.5 2.8e-4   NR XP_013762411.1 461836 g11656 i0 34.2 0.960526315789474 73 47 94.7 1 227 12 608 680 XP_013762411.1 uncharacterized protein AMSG_00680 [Thecamonas trahens ATCC 50062] diamond 219 48.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32330845 32330845 PRJNA811237_S_NODE_24339_length_175_cov_1.619048_g24099_i0 PRJNA811237 24339 175 1.619048 2.833334 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 94.4 7.530000000000001e-21   NR XP_013758206.1 461836 g24099 i0 67.2 1.98857142857143 58 19 99.4 0 175 2 264 321 XP_013758206.1 AGC/AKT protein kinase [Thecamonas trahens ATCC 50062] diamond 348 94.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32330857 32330857 PRJNA811237_S_NODE_33239_length_163_cov_0.894737_g32999_i0 PRJNA811237 33239 163 0.894737 1.45842131 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 53.9 5.89e-7   NR XP_013756150.1 461836 g32999 i0 51.9 1.87730061349693 52 23 92 1 161 12 38 89 XP_013756150.1 uncharacterized protein AMSG_07689 [Thecamonas trahens ATCC 50062] diamond 306 53.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;