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contig_metadata

28 rows where bioproject = "PRJNA811237", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 28 ✖

tax_clade 1

  • Amoebozoa · 28 ✖

bioproject 1

  • PRJNA811237 · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7187069 7187069 PRJNA811237_S_NODE_2806_length_431_cov_6.007853_g2566_i0 PRJNA811237 2806 431 6.007853 25.89384643 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 211 2.04e-67   NR XP_004368153.1 1257118 g2566 i0 73.6 1.94199535962877 140 35 96.1 1 428 15 3 142 XP_004368153.1 ribosomal protein S17, putative [Acanthamoeba castellanii str. Neff] diamond 837 211 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7187108 7187108 PRJNA811237_S_NODE_7006_length_280_cov_6.060606_g6766_i0 PRJNA811237 7006 280 6.060606 16.9696968 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 100 9.08e-17   NTclustered gi|470458047|ref|XM_004341152.1| 1257118 g6766 i0 90.667 7.175 75 7 27 0 2 76 157 231 Acanthamoeba castellanii str. Neff polyubiquitin, putative (ACA1_335920), partial mRNA blastn 2009 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9736923 9736923 PRJNA811237_S_NODE_5208_length_319_cov_1.003704_g4968_i0 PRJNA811237 5208 319 1.003704 3.20181576 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 54.7 0.008   NTclustered gi|470469247|ref|XM_004341931.1| 1257118 g4968 i0 94.444 0.112852664576803 36 1 11 1 218 253 1385 1351 Acanthamoeba castellanii str. Neff K+ channel tetramerization subfamily protein (ACA1_050340), partial mRNA blastn 36 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9736929 9736929 PRJNA811237_S_NODE_6948_length_282_cov_0.978541_g6708_i0 PRJNA811237 6948 282 0.978541 2.75948562 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.1 1.22e-15   NR XP_004341552.1 1257118 g6708 i0 44.7 0.904255319148936 85 45 88.3 1 25 273 90 174 XP_004341552.1 oxidoreductase, short chain dehydrogenase/reductase superfamily protein [Acanthamoeba castellanii str. Neff] diamond 255 80.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11012691 11012691 PRJNA811237_S_NODE_20409_length_188_cov_1.100719_g20169_i0 PRJNA811237 20409 188 1.100719 2.06935172 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 107 9.1e-28   NR XP_004356682.1 1257118 g20169 i0 83.9 11.8723404255319 62 10 98.9 0 186 1 62 123 XP_004356682.1 ribosomal protein S15, putative [Acanthamoeba castellanii str. Neff] diamond 2232 107 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11012708 11012708 PRJNA811237_S_NODE_29529_length_166_cov_0.863248_g29289_i0 PRJNA811237 29529 166 0.863248 1.43299168 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.014   NTclustered gi|470512615|ref|XM_004352463.1| 1257118 g29289 i0 100 0.168674698795181 28 0 17 0 91 118 88 61 Acanthamoeba castellanii str. Neff GTPaseactivator protein for Ras-like GTPase (ACA1_360540), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19935408 19935408 PRJNA811237_S_NODE_1636_length_568_cov_7.641618_g1399_i0 PRJNA811237 1636 568 7.641618 43.40439024 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 295 2.999999999999999e-98   NR XP_004341437.1 1257118 g1399 i0 73.5 0.998239436619718 189 50 99.8 0 568 2 2 190 XP_004341437.1 ribosomal proteins l2, RNA binding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 567 295 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19935429 19935429 PRJNA811237_S_NODE_2496_length_457_cov_8.835784_g2257_i0 PRJNA811237 2496 457 8.835784 40.37953288 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 178 1.0199999999999997e-54   NR XP_004333102.1 1257118 g2257 i0 69.7 3.47921225382932 132 40 86.7 0 19 414 1 132 XP_004333102.1 ribosomal protein L32, putative [Acanthamoeba castellanii str. Neff] diamond 1590 178 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27970207 27970207 PRJNA811237_S_NODE_9505_length_248_cov_1.261307_g9265_i0 PRJNA811237 9505 248 1.261307 3.12804136 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 119 9.6e-33   NR 1PRQ_A 5755 g9265 i0 68.4 2.86693548387097 79 25 95.6 0 245 9 47 125 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] diamond 711 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28096537 28096537 PRJNA811237_S_NODE_32985_length_163_cov_0.894737_g32745_i0 PRJNA811237 32985 163 0.894737 1.45842131 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.1 3.19e-5   NR XP_004341127.1 1257118 g32745 i0 50 0.773006134969325 42 21 77.3 0 161 36 301 342 XP_004341127.1 calpain family cysteine protease domain containing protein [Acanthamoeba castellanii str. Neff] diamond 126 50.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28159874 28159874 PRJNA811237_S_NODE_14225_length_214_cov_0.866667_g13985_i0 PRJNA811237 14225 214 0.866667 1.85466738 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47.4 2.79e-4   NR XP_004353418.1 1257118 g13985 i0 47.3 0.771028037383178 55 23 68.7 2 213 67 69 123 XP_004353418.1 CHCH domain containing protein [Acanthamoeba castellanii str. Neff] diamond 165 47.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28475472 28475472 PRJNA811237_S_NODE_29386_length_166_cov_0.871795_g29146_i0 PRJNA811237 29386 166 0.871795 1.4471797 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 40.8 0.0333   NR XP_004343333.1 1257118 g29146 i0 44.8 1.04819277108434 58 27 95.8 2 6 164 15 72 XP_004343333.1 signal peptide peptidase, putative [Acanthamoeba castellanii str. Neff] diamond 174 40.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28484312 28484312 PRJNA811237_S_NODE_31526_length_164_cov_0.886957_g31286_i0 PRJNA811237 31526 164 0.886957 1.45460948 Acanthamoeba 5754 Discosea other_Eukaryota 69.7 3.56e-13   NR ABD46577.1 5755 g31286 i0 64.6 1.75609756097561 48 17 87.8 0 160 17 30 77 ABD46577.1 lactate dehydrogenase-like protein, partial [Acanthamoeba castellanii] diamond 288 69.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28728041 28728041 PRJNA811237_S_NODE_26667_length_169_cov_1.025000_g26427_i0 PRJNA811237 26667 169 1.025 1.73225 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 68.6 8.22e-12   NR XP_004353067.1 1257118 g26427 i0 61.1 0.958579881656805 54 20 94.1 1 8 166 263 316 XP_004353067.1 short-chain dehydrogenase [Acanthamoeba castellanii str. Neff] diamond 162 68.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29075515 29075515 PRJNA811237_S_NODE_21228_length_185_cov_1.294118_g20988_i0 PRJNA811237 21228 185 1.294118 2.3941183 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 63.5 2.6e-10   NR XP_004337446.1 1257118 g20988 i0 47.5 0.989189189189189 61 32 98.9 0 3 185 90 150 XP_004337446.1 Vesicle-associated membrane protein, putative [Acanthamoeba castellanii str. Neff] diamond 183 63.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29138724 29138724 PRJNA811237_S_NODE_18009_length_197_cov_1.033784_g17769_i0 PRJNA811237 18009 197 1.033784 2.03655448 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 61.2 5.69e-9   NR XP_004335206.1 1257118 g17769 i0 49.2 0.989847715736041 65 22 99 1 3 197 261 314 XP_004335206.1 NAD-dependent epimerase/dehydratase family protein [Acanthamoeba castellanii str. Neff] diamond 195 61.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29453863 29453863 PRJNA811237_S_NODE_9010_length_253_cov_2.750000_g8770_i0 PRJNA811237 9010 253 2.75 6.9575 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 56.2 7.33e-7   NR XP_004342569.1 1257118 g8770 i0 39.7 0.924901185770751 78 47 92.5 0 243 10 142 219 XP_004342569.1 fatty acid desaturase subfamily protein [Acanthamoeba castellanii str. Neff] diamond 234 56.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29462687 29462687 PRJNA811237_S_NODE_8270_length_262_cov_1.436620_g8030_i0 PRJNA811237 8270 262 1.43662 3.7639444 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 41.2 0.0261   NR XP_004336974.1 1257118 g8030 i0 53.3 0.778625954198473 30 14 34.4 0 220 131 41 70 XP_004336974.1 DSS1/SEM1 family protein [Acanthamoeba castellanii str. Neff] diamond 204 41.6 0.990384615384615 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29548755 29548755 PRJNA811237_S_NODE_5630_length_308_cov_1.378378_g5390_i0 PRJNA811237 5630 308 1.378378 4.24540424 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 96.7 2.5900000000000003e-21   NR XP_004336540.1 1257118 g5390 i0 44.4 0.964285714285714 99 55 96.4 0 297 1 186 284 XP_004336540.1 sterol 24c-methyltransferase [Acanthamoeba castellanii str. Neff] diamond 297 96.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29674926 29674926 PRJNA811237_S_NODE_6190_length_296_cov_2.085020_g5950_i0 PRJNA811237 6190 296 2.08502 6.1716592 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.3 2.6e-17   NR XP_004340296.1 1257118 g5950 i0 45.5 1.11486486486486 110 43 99.3 3 2 295 260 364 XP_004340296.1 uncharacterized protein ACA1_370300 [Acanthamoeba castellanii str. Neff] diamond 330 86.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30717654 30717654 PRJNA811237_S_NODE_33734_length_162_cov_1.097345_g33494_i0 PRJNA811237 33734 162 1.097345 1.7776989 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.1 1.52e-4   NR XP_004333053.1 1257118 g33494 i0 44.7 0.87037037037037 47 26 87 0 18 158 403 449 XP_004333053.1 rieske [2fe2s] domain containing protein [Acanthamoeba castellanii str. Neff] diamond 141 48.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30812462 30812462 PRJNA811237_S_NODE_11514_length_230_cov_2.071823_g11274_i0 PRJNA811237 11514 230 2.071823 4.7651929 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87.4 2.4e-20   NR XP_004339748.1 1257118 g11274 i0 54.7 0.978260869565217 75 34 97.8 0 227 3 23 97 XP_004339748.1 glutaredoxin, putative [Acanthamoeba castellanii str. Neff] diamond 225 87.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31128136 31128136 PRJNA811237_S_NODE_25455_length_172_cov_1.430894_g25215_i0 PRJNA811237 25455 172 1.430894 2.46113768 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 52.4 5.75e-6   NR XP_004368205.1 1257118 g25215 i0 58.5 0.715116279069767 41 16 69.8 1 169 50 54 94 XP_004368205.1 RNA binding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 123 52.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31864512 31864512 PRJNA811237_S_NODE_5897_length_302_cov_2.300395_g5657_i0 PRJNA811237 5897 302 2.300395 6.9471929 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 106 1.2e-24   NR XP_004341586.1 1257118 g5657 i0 52.3 2.60264900662252 88 41 86.4 1 3 263 321 408 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 786 106 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32235939 32235939 PRJNA811237_S_NODE_21778_length_183_cov_1.522388_g21538_i0 PRJNA811237 21778 183 1.522388 2.78597004 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 79 3.47e-16   NR XP_004336066.1 1257118 g21538 i0 60.3 6.65573770491803 58 23 95.1 0 179 6 56 113 XP_004336066.1 NAD(P)H:quinone oxidoreductase, type IV, putative [Acanthamoeba castellanii str. Neff] diamond 1218 79 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32362427 32362427 PRJNA811237_S_NODE_6019_length_300_cov_1.418327_g5779_i0 PRJNA811237 6019 300 1.418327 4.254981 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.9 1.78e-15   NR XP_004336427.1 1257118 g5779 i0 39.2 1.02 102 58 98 2 297 4 212 313 XP_004336427.1 phospholipase a2, putative [Acanthamoeba castellanii str. Neff] diamond 306 80.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32488902 32488902 PRJNA811237_S_NODE_18379_length_195_cov_2.328767_g18139_i0 PRJNA811237 18379 195 2.328767 4.54109565 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 71.6 1.29e-12   NR BBN23851.1 5755 g18139 i0 55.6 2.89230769230769 63 28 96.9 0 7 195 100 162 BBN23851.1 serine protease precursor, partial [Acanthamoeba castellanii] diamond 564 71.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32709388 32709388 PRJNA811237_S_NODE_16060_length_205_cov_1.307692_g15820_i0 PRJNA811237 16060 205 1.307692 2.6807686 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 51.6 1.71e-5   NR XP_004367848.1 1257118 g15820 i0 37.9 0.965853658536585 66 41 96.6 0 198 1 191 256 XP_004367848.1 conditioned medium factor, putative [Acanthamoeba castellanii str. Neff] diamond 198 51.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;