RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807836" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA807836 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29106965 29106965 PRJNA807836_S_NODE_23728_length_275_cov_3.039604_g23452_i0 PRJNA807836 23728 275 3.039604 8.358911 Chloroflexota bacterium 2026724 Bacteria Bacteria 44.3 0.0149   NR PZC44690.1 2026724 g23452 i0 33.8 0.774545454545455 71 40 74.2 2 70 273 118 184 PZC44690.1 MAG: Nucleoside-diphosphate-sugar epimerase [Chloroflexota bacterium] diamond 213 44.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29896366 29896366 PRJNA807836_S_NODE_29971_length_244_cov_0.900585_g29695_i0 PRJNA807836 29971 244 0.900585 2.1974274 Anaerolineales bacterium 2073117 Bacteria Bacteria 43.5 0.0195   NR NOR90439.1 2073117 g29695 i0 43.3 0.737704918032787 60 30 71.3 2 186 13 282 339 NOR90439.1 GNAT family N-acetyltransferase [Anaerolineales bacterium] diamond 180 43.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;