RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807836" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA807836 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28507037 28507037 PRJNA807836_S_NODE_29607_length_245_cov_0.889535_g29331_i0 PRJNA807836 29607 245 0.889535 2.17936075 Rose yellow vein virus 1213588 Viruses Viruses 60.1 2.97e-8   NR YP_007761644.1 1213588 g29331 i0 38.8 0.979591836734694 80 47 98 2 5 244 261 338 YP_007761644.1 reverse transcriptase [Rose yellow vein virus] diamond 240 60.1 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Rosadnavirus Rosadnavirus venarosae
32172470 32172470 PRJNA807836_S_NODE_22358_length_286_cov_0.859155_g22082_i0 PRJNA807836 22358 286 0.859155 2.4571833 Viola yellow mottle virus 2922803 Viruses Viruses 94.7 3.29e-20   NR UML14526.1 2922803 g22082 i0 51.2 0.881118881118881 84 41 88.1 0 12 263 286 369 UML14526.1 polymerase [Viola yellow mottle virus] diamond 252 94.7 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Rosadnavirus Rosadnavirus maculaviolae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;