RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807836" and tax_clade = "Stenosarchaea group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA807836 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13561111 13561111 PRJNA807836_S_NODE_8211_length_545_cov_3.711864_g7942_i0 PRJNA807836 8211 545 3.711864 20.2296588 Methanosarcina barkeri 2208 Archaea Archaea 54.7 0.015   NTclustered gi|805384997|gb|CP009517.1| 1434107 g7942 i0 100 0.106422018348624 29 0 5 0 110 138 3302450 3302478 Methanosarcina barkeri 3, complete genome blastn 58 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri
30875685 30875685 PRJNA807836_S_NODE_31174_length_241_cov_0.916667_g30898_i0 PRJNA807836 31174 241 0.916667 2.20916747 Methanochimaera problematica 2609417 Archaea Archaea 43.1 0.0265   NR WP_408669651.1 2609417 g30898 i0 40.4 0.647302904564315 52 29 62.2 1 232 83 162 213 WP_408669651.1 flippase activity-associated protein Agl23 [Methanochimaera problematica] diamond 156 43.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanochimaera Methanochimaera problematica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;