RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807836", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA807836 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27401999 27401999 PRJNA807836_S_NODE_22143_length_287_cov_1.971963_g21867_i0 PRJNA807836 22143 287 1.971963 5.65953381 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.0131   NR CDW73079.1 5949 g21867 i0 36.1 1.49477351916376 61 37 63.8 1 257 75 369 427 CDW73079.1 fha domain containing protein [Stylonychia lemnae] diamond 429 44.7 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
30220926 30220926 PRJNA807836_S_NODE_30392_length_243_cov_0.905882_g30116_i0 PRJNA807836 30392 243 0.905882 2.20129326 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 119 4.53e-30   NR CAD8180050.1 43137 g30116 i0 71.3 3.95061728395062 80 23 98.8 0 242 3 296 375 CAD8180050.1 unnamed protein product [Paramecium octaurelia] diamond 960 119 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;