RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807836", tax_clade = "Opisthokonta" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA807836 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2082837 2082837 PRJNA807836_S_NODE_22262_length_286_cov_2.267606_g21986_i0 PRJNA807836 22262 286 2.267606 6.48535316 Heliocidaris tuberculata 7635 Echinodermata other_Eukaryota 67.6 9.44e-7   NTclustered gi|160623357|gb|EU282123.1| 7635 g21986 i0 90.385 0.513986013986014 52 4 18 1 75 125 507 456 Heliocidaris tuberculata putative 14-3-3 epsilon isoform mRNA, complete cds blastn 147 67.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Echinometridae Heliocidaris Heliocidaris tuberculata
25033382 25033382 PRJNA807836_S_NODE_14440_length_372_cov_2.404682_g14164_i0 PRJNA807836 14440 372 2.404682 8.94541704 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 56.5 0.003   NTclustered gi|1752361274|ref|XM_030985419.1| 7668 g14164 i0 100 0.241935483870968 30 0 8 0 206 235 411 440 PREDICTED: Strongylocentrotus purpuratus uncharacterized LOC115923994 (LOC115923994), transcript variant X1, mRNA blastn 90 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;