contig_metadata
6 rows where bioproject = "PRJNA807685" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4634887 | 4634887 | PRJNA807685_P_NODE_21704_length_295_cov_1.124031_g20631_i0 | PRJNA807685 | 21704 | 295 | 1.124031 | 3.31589145 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 191 | 5.56e-44 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g20631 | i0 | 78.819 | 1.30508474576271 | 288 | 58 | 97 | 3 | 9 | 295 | 3516600 | 3516885 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 385 | 191 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 11010245 | 11010245 | PRJNA807685_P_NODE_14069_length_410_cov_1.576408_g13003_i0 | PRJNA807685 | 14069 | 410 | 1.576408 | 6.4632728 | Bacteria | 2 | Bacteria | Bacteria | 199 | 2.13e-59 | NR | MBA4149782.1 | 2026799 | g13003 | i0 | 67.9 | 25.5804878048781 | 134 | 43 | 98 | 0 | 2 | 403 | 211 | 344 | MBA4149782.1 SDR family NAD(P)-dependent oxidoreductase [Verrucomicrobiota bacterium] | diamond | 10488 | 199 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30148750 | 30148750 | PRJNA807685_P_NODE_17032_length_355_cov_1.855346_g15962_i0 | PRJNA807685 | 17032 | 355 | 1.855346 | 6.5864783 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 75.5 | 2.63e-14 | NR | HNC23408.1 | 2006848 | g15962 | i0 | 55.6 | 0.53239436619718306 | 63 | 28 | 53.2 | 0 | 332 | 144 | 95 | 157 | HNC23408.1 hypothetical protein [Opitutaceae bacterium] | diamond | 189 | 75.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 30180466 | 30180466 | PRJNA807685_P_NODE_40972_length_192_cov_0.987097_g39899_i0 | PRJNA807685 | 40972 | 192 | 0.987097 | 1.89522624 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 122 | 1.14e-30 | NR | MCI0539974.1 | 2026801 | g39899 | i0 | 96.8 | 1.9375 | 62 | 2 | 96.9 | 0 | 6 | 191 | 50 | 111 | MCI0539974.1 recombinase family protein [Verrucomicrobiales bacterium] | diamond | 372 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 30812410 | 30812410 | PRJNA807685_P_NODE_38494_length_199_cov_1.191358_g37421_i0 | PRJNA807685 | 38494 | 199 | 1.191358 | 2.37080242 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 49.3 | 9.93e-5 | NR | HZQ48391.1 | 2499141 | g37421 | i0 | 42.6 | 0.919597989949749 | 61 | 34 | 92 | 1 | 195 | 13 | 130 | 189 | HZQ48391.1 sulfotransferase [Verrucomicrobiia bacterium] | diamond | 183 | 49.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 32844117 | 32844117 | PRJNA807685_P_NODE_7960_length_640_cov_2.718076_g6987_i0 | PRJNA807685 | 7960 | 640 | 2.718076 | 17.3956864 | Candidatus Didemnitutus | 2055839 | Bacteria | Bacteria | 219 | 2.2699999999999997e-66 | NR | HVS51589.1 | 2006848 | g6987 | i0 | 56.4 | 7.6546875 | 204 | 84 | 93.3 | 2 | 19 | 615 | 135 | 338 | HVS51589.1 alpha/beta hydrolase [Opitutaceae bacterium] | diamond | 4899 | 219 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;