RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807685" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA807685 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26714511 26714511 PRJNA807685_P_NODE_31581_length_226_cov_1.539683_g30508_i0 PRJNA807685 31581 226 1.539683 3.47968358 Bacteria 2 Bacteria Bacteria 55.5 9.24e-7   NR MCX6141929.1 2049428 g30508 i0 47.6 1.67256637168142 63 30 79.6 1 206 27 298 360 MCX6141929.1 alginate lyase family protein [Ignavibacteriales bacterium] diamond 378 55.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
27812538 27812538 PRJNA807685_P_NODE_62224_length_156_cov_1.126050_g61151_i0 PRJNA807685 62224 156 1.12605 1.756638 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 56.2 1.03e-7   NR HEY6438199.1 2651163 g61151 i0 48.1 13.25 52 27 100 0 156 1 127 178 HEY6438199.1 ankyrin repeat domain-containing protein [Ignavibacteriaceae bacterium] diamond 2067 56.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;