RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA807685" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA807685 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3357338 3357338 PRJNA807685_P_NODE_1703_length_3754_cov_2.620393_g1397_i0 PRJNA807685 1703 3754 2.620393 98.36955322 Pseudomonadati 3379134 Bacteria Bacteria 525 2.89e-172   NR MFA5947900.1 2044595 g1397 i0 71.3 1.51518380394246 394 110 31.5 2 2604 1423 5 395 MFA5947900.1 MFS transporter [Candidatus Altimarinota bacterium] diamond 5688 526 0.998098859315589 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;