RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807685" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA807685 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27243808 27243808 PRJNA807685_P_NODE_48303_length_176_cov_1.050360_g47230_i0 PRJNA807685 48303 176 1.05036 1.8486336 Armatimonadota bacterium 2033014 Bacteria Bacteria 72.8 3.81e-13   NR MDQ3812641.1 2033014 g47230 i0 70.9 4.67045454545455 55 14 92 2 176 15 333 386 MDQ3812641.1 polysaccharide lyase family protein [Armatimonadota bacterium] diamond 822 72.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31697675 31697675 PRJNA807685_P_NODE_51697_length_170_cov_1.150376_g50624_i0 PRJNA807685 51697 170 1.150376 1.9556392 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 79 2.33e-15   NR HLK55482.1 2739509 g50624 i0 70.4 0.952941176470588 54 16 95.3 0 167 6 129 182 HLK55482.1 Fic family protein [Chthonomonadaceae bacterium] diamond 162 79 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;