RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA807685", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA807685 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12286083 12286083 PRJNA807685_P_NODE_51970_length_169_cov_1.962121_g50897_i0 PRJNA807685 51970 169 1.962121 3.31598449 Halisarca dujardinii 2583056 Porifera other_Eukaryota 54.7 0.004   NTclustered gi|2006291173|gb|MT879109.1| 2583056 g50897 i0 100 0.171597633136095 29 0 17 0 69 97 441 469 Halisarca dujardinii metal regulatory transcription factor 1 mRNA, complete cds blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Chondrillida Halisarcidae Halisarca Halisarca dujardinii
28349024 28349024 PRJNA807685_P_NODE_36606_length_205_cov_1.458333_g35533_i0 PRJNA807685 36606 205 1.458333 2.98958265 Dysidea avara 196820 Porifera other_Eukaryota 55.5 5.18e-7   NR XP_065892171.1 196820 g35533 i0 50 4.97560975609756 68 32 96.6 1 200 3 155 222 XP_065892171.1 uncharacterized protein [Dysidea avara] diamond 1020 55.5 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
30654378 30654378 PRJNA807685_P_NODE_39153_length_197_cov_1.218750_g38080_i0 PRJNA807685 39153 197 1.21875 2.4009375 Oopsacas minuta 111878 Porifera other_Eukaryota 95.5 5.3100000000000005e-21   NR KAI6653593.1 111878 g38080 i0 74.1 0.883248730964467 58 15 88.3 0 2 175 365 422 KAI6653593.1 Long-chain-fatty-acid--CoA ligase ACSBG2 isoform X4 [Oopsacas minuta] diamond 174 95.5 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;