RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807685", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA807685 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26642530 26642530 PRJNA807685_P_NODE_26101_length_258_cov_1.900452_g25028_i0 PRJNA807685 26101 258 1.900452 4.90316616 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 41.6 0.0369   NR MBA2727931.1 2052176 g25028 i0 34.8 0.534883720930233 46 30 53.5 0 182 45 7 52 MBA2727931.1 hypothetical protein [Parachlamydiaceae bacterium] diamond 138 41.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31033953 31033953 PRJNA807685_P_NODE_56555_length_163_cov_0.928571_g55482_i0 PRJNA807685 56555 163 0.928571 1.51357073 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 117 1.11e-30   NR MFI0436136.1 2052176 g55482 i0 98.1 1.98773006134969 54 1 99.4 0 2 163 76 129 MFI0436136.1 phage portal protein [Parachlamydiaceae bacterium] diamond 324 117 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;