RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA807685", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA807685 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21208930 21208930 PRJNA807685_P_NODE_48177_length_176_cov_1.309353_g47104_i0 PRJNA807685 48177 176 1.309353 2.30446128 Candidatus Nanosynbacter sp. HMT-348_TM7c-JB 2933970 Bacteria Bacteria 309 7.98e-80   NTclustered gi|2179907571|gb|CP090820.1| 2933970 g47104 i0 98.295 1 176 3 100 0 1 176 216750 216575 MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome blastn 176 309 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-348_TM7c-JB
31832868 31832868 PRJNA807685_P_NODE_60017_length_158_cov_1.909091_g58944_i0 PRJNA807685 60017 158 1.909091 3.01636378 Candidatus Saccharimonadota 95818 Bacteria Bacteria 105 6.73e-25   NR OGL22648.1 1802132 g58944 i0 94.2 13.8227848101266 52 3 98.7 0 1 156 359 410 OGL22648.1 MAG: polyribonucleotide nucleotidyltransferase [Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_45_15] diamond 2184 105 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_45_15
32803796 32803796 PRJNA807685_P_NODE_55200_length_164_cov_2.259843_g54127_i0 PRJNA807685 55200 164 2.259843 3.70614252 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 101 1.96e-24   NR MAU33634.1 2026720 g54127 i0 94.4 0.98780487804878 54 3 98.8 0 163 2 11 64 MAU33634.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 162 101 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;