contig_metadata
15 rows where bioproject = "PRJNA807347" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11010150 | 11010150 | PRJNA807347_P_NODE_15369_length_245_cov_0.906977_g15266_i0 | PRJNA807347 | 15369 | 245 | 0.906977 | 2.22209365 | Bacteria | 2 | Bacteria | Bacteria | 61.2 | 1.16e-8 | NR | MDZ4818058.1 | 2026780 | g15266 | i0 | 63.3 | 1.48163265306122 | 49 | 18 | 60 | 0 | 3 | 149 | 744 | 792 | MDZ4818058.1 ribonuclease R [Planctomycetota bacterium] | diamond | 363 | 61.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 13976398 | 13976398 | PRJNA807347_P_NODE_16991_length_242_cov_0.923077_g16888_i0 | PRJNA807347 | 16991 | 242 | 0.923077 | 2.23384634 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 87.8 | 6.55e-20 | NR | RMH30670.1 | 2026780 | g16888 | i0 | 60.8 | 1.83471074380165 | 74 | 25 | 91.7 | 1 | 222 | 1 | 1 | 70 | RMH30670.1 MAG: CBS domain-containing protein [Planctomycetota bacterium] | diamond | 444 | 87.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 16108746 | 16108746 | PRJNA807347_P_NODE_17653_length_231_cov_2.246835_g17550_i0 | PRJNA807347 | 17653 | 231 | 2.246835 | 5.19018885 | Candidatus Brocadia pituitae | 2608983 | Bacteria | Bacteria | 195 | 3.24e-45 | NTclustered | gi|1996211272|dbj|AP021856.1| | 2608983 | g17550 | i0 | 84.236 | 7.94372294372294 | 203 | 28 | 87 | 4 | 30 | 230 | 2794310 | 2794510 | Candidatus Brocadia pituitae DNA, complete genome | blastn | 1835 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Brocadiaceae | Candidatus Brocadia | Candidatus Brocadia pituitae | |
| 27568456 | 27568456 | PRJNA807347_P_NODE_7704_length_295_cov_1.036036_g7601_i0 | PRJNA807347 | 7704 | 295 | 1.036036 | 3.0563062 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 101 | 1.9300000000000001e-22 | NR | MCZ6573397.1 | 2026780 | g7601 | i0 | 52.6 | 2.96949152542373 | 97 | 46 | 98.6 | 0 | 1 | 291 | 363 | 459 | MCZ6573397.1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Planctomycetota bacterium] | diamond | 876 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27906751 | 27906751 | PRJNA807347_P_NODE_15865_length_244_cov_0.912281_g15762_i0 | PRJNA807347 | 15865 | 244 | 0.912281 | 2.22596564 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 43.5 | 0.0187 | NR | MBX3393132.1 | 2026777 | g15762 | i0 | 33.3 | 0.774590163934426 | 63 | 39 | 73.8 | 2 | 197 | 18 | 10 | 72 | MBX3393132.1 hypothetical protein [Phycisphaeraceae bacterium] | diamond | 189 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 28231352 | 28231352 | PRJNA807347_P_NODE_11826_length_252_cov_2.385475_g11723_i0 | PRJNA807347 | 11826 | 252 | 2.385475 | 6.011397 | Candidatus Brocadia | 380240 | Bacteria | Bacteria | 149 | 1.6e-39 | NR | WP_052564505.1 | 380240 | g11723 | i0 | 80 | 5.05952380952381 | 85 | 16 | 100 | 1 | 1 | 252 | 345 | 429 | WP_052564505.1 MULTISPECIES: hypothetical protein [Candidatus Brocadia] | diamond | 1275 | 150 | 0.993333333333333 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Brocadiaceae | Candidatus Brocadia | ||
| 29517157 | 29517157 | PRJNA807347_P_NODE_17290_length_241_cov_3.863095_g17187_i0 | PRJNA807347 | 17290 | 241 | 3.863095 | 9.31005895 | Isosphaeraceae bacterium | 2691532 | Bacteria | Bacteria | 102 | 3.33e-23 | NR | HMB03686.1 | 2691532 | g17187 | i0 | 74.3 | 2.75103734439834 | 70 | 16 | 87.1 | 1 | 30 | 239 | 413 | 480 | HMB03686.1 cytochrome b N-terminal domain-containing protein [Isosphaeraceae bacterium] | diamond | 663 | 102 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium | ||
| 29643251 | 29643251 | PRJNA807347_P_NODE_13930_length_248_cov_0.885714_g13827_i0 | PRJNA807347 | 13930 | 248 | 0.885714 | 2.19657072 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 87.8 | 5.51e-18 | NR | MBL8870221.1 | 2026779 | g13827 | i0 | 57.3 | 0.991935483870968 | 82 | 35 | 99.2 | 0 | 246 | 1 | 692 | 773 | MBL8870221.1 DUF1553 domain-containing protein [Planctomycetaceae bacterium] | diamond | 246 | 87.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 30780845 | 30780845 | PRJNA807347_P_NODE_8634_length_282_cov_2.315789_g8531_i0 | PRJNA807347 | 8634 | 282 | 2.315789 | 6.53052498 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 75.5 | 1.4e-14 | NR | HEY7422863.1 | 2052164 | g8531 | i0 | 47.1 | 0.925531914893617 | 87 | 38 | 84 | 1 | 1 | 237 | 91 | 177 | HEY7422863.1 serpin family protein [Gemmataceae bacterium] | diamond | 261 | 75.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 31002129 | 31002129 | PRJNA807347_P_NODE_16314_length_243_cov_0.917647_g16211_i0 | PRJNA807347 | 16314 | 243 | 0.917647 | 2.22988221 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 141 | 3.0699999999999997e-37 | NR | MBL8874085.1 | 2026779 | g16211 | i0 | 81.3 | 0.987654320987654 | 80 | 15 | 98.8 | 0 | 241 | 2 | 24 | 103 | MBL8874085.1 DEAD/DEAH box helicase family protein [Planctomycetaceae bacterium] | diamond | 240 | 141 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 31476392 | 31476392 | PRJNA807347_P_NODE_12036_length_252_cov_0.871508_g11933_i0 | PRJNA807347 | 12036 | 252 | 0.871508 | 2.19620016 | Phycisphaera sp. | 2030824 | Bacteria | Bacteria | 165 | 2.52e-45 | NR | MBI1302998.1 | 2030824 | g11933 | i0 | 98.8 | 0.988095238095238 | 83 | 1 | 98.8 | 0 | 3 | 251 | 602 | 684 | MBI1302998.1 hypothetical protein [Phycisphaera sp.] | diamond | 249 | 165 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaera | Phycisphaera sp. | |
| 31539644 | 31539644 | PRJNA807347_P_NODE_14416_length_247_cov_0.890805_g14313_i0 | PRJNA807347 | 14416 | 247 | 0.890805 | 2.20028835 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 146 | 7.12e-39 | NR | MBL0870494.1 | 2052180 | g14313 | i0 | 98.6 | 0.862348178137652 | 71 | 1 | 86.2 | 0 | 247 | 35 | 613 | 683 | MBL0870494.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein [Phycisphaerales bacterium] | diamond | 213 | 146 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 31697663 | 31697663 | PRJNA807347_P_NODE_8777_length_281_cov_0.889423_g8674_i0 | PRJNA807347 | 8777 | 281 | 0.889423 | 2.49927863 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 41.2 | 0.0451 | NR | MBI4614341.1 | 2026780 | g8674 | i0 | 33.8 | 0.725978647686833 | 68 | 39 | 69.4 | 2 | 50 | 244 | 21 | 85 | MBI4614341.1 UPF0175 family protein [Planctomycetota bacterium] | diamond | 204 | 41.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31887366 | 31887366 | PRJNA807347_P_NODE_14517_length_247_cov_0.885057_g14414_i0 | PRJNA807347 | 14517 | 247 | 0.885057 | 2.18609079 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 42.7 | 0.0352 | NR | HKB40427.1 | 2052164 | g14414 | i0 | 36 | 1.08097165991903 | 89 | 45 | 93.5 | 3 | 245 | 15 | 78 | 166 | HKB40427.1 methyltransferase domain-containing protein [Gemmataceae bacterium] | diamond | 267 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 32140669 | 32140669 | PRJNA807347_P_NODE_16758_length_242_cov_1.781065_g16655_i0 | PRJNA807347 | 16758 | 242 | 1.781065 | 4.3101773 | Sedimentisphaera salicampi | 1941349 | Bacteria | Bacteria | 57 | 3.32e-7 | NR | WP_094759418.1 | 1941349 | g16655 | i0 | 68.4 | 1.88429752066116 | 38 | 12 | 47.1 | 0 | 145 | 32 | 318 | 355 | WP_094759418.1 tryptophan synthase subunit beta [Sedimentisphaera salicampi] | diamond | 456 | 57 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Sedimentisphaeraceae | Sedimentisphaera | Sedimentisphaera salicampi |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;