RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807347", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA807347 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27938693 27938693 PRJNA807347_P_NODE_5945_length_337_cov_1.125000_g5842_i0 PRJNA807347 5945 337 1.125 3.79125 Chuvivirus 2842604 Viruses Viruses 124 1.8e-30   NR UVF58769.1 2842604 g5842 i0 64 1.52225519287834 86 31 76.6 0 78 335 338 423 UVF58769.1 MAG: S protein [Salarius guttatus piscichuvirus] diamond 513 124 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Chuvivirus
32371113 32371113 PRJNA807347_P_NODE_8679_length_282_cov_1.377990_g8576_i0 PRJNA807347 8679 282 1.37799 3.8859318 Chuvivirus 2842604 Viruses Viruses 136 9.65e-36   NR WET19887.1 2842604 g8576 i0 67 2.91489361702128 91 30 96.8 0 4 276 290 380 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 822 136 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;