RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807347" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA807347 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27843698 27843698 PRJNA807347_P_NODE_11384_length_255_cov_1.412088_g11281_i0 PRJNA807347 11384 255 1.412088 3.6008244 Acholeplasmataceae bacterium 1898209 Bacteria Bacteria 129 4.47e-34   NR MCK9234970.1 1898209 g11281 i0 70.6 1 85 24 98.8 1 255 4 256 340 MCK9234970.1 hypothetical protein [Acholeplasmataceae bacterium] diamond 255 129 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae   Acholeplasmataceae bacterium
28854060 28854060 PRJNA807347_P_NODE_13868_length_248_cov_0.891429_g13765_i0 PRJNA807347 13868 248 0.891429 2.21074392 Spiroplasma syrphidicola 216945 Bacteria Bacteria 88.6 4.95e-19   NR WP_016341071.1 216945 g13765 i0 58.2 0.810483870967742 67 28 81 0 4 204 121 187 WP_016341071.1 aldo/keto reductase [Spiroplasma syrphidicola] diamond 201 88.6 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma syrphidicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;