RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA807347" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA807347 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7184579 7184579 PRJNA807347_P_NODE_1966_length_596_cov_2.397706_g1865_i0 PRJNA807347 1966 596 2.397706 14.29032776 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 985 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1865 i0 96.477 67.3406040268456 596 21 100 0 1 596 605 10 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 40135 985 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
7184600 7184600 PRJNA807347_P_NODE_6926_length_311_cov_1.903361_g6823_i0 PRJNA807347 6926 311 1.903361 5.91945271 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 158 1.7699999999999996e-47   NR CDW86855.1 5949 g6823 i0 74.5 10.8327974276527 102 26 98.4 0 310 5 30 131 CDW86855.1 nucleoside diphosphate kinase [Stylonychia lemnae] diamond 3369 159 0.993710691823899 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
8875790 8875790 PRJNA807347_P_NODE_7987_length_290_cov_1.755760_g7884_i0 PRJNA807347 7987 290 1.75576 5.091704 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 520 6.119999999999998e-143   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g7884 i0 98.966 22.944827586206905 290 3 100 0 1 290 1165 1454 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 6654 520 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
16108696 16108696 PRJNA807347_P_NODE_1193_length_750_cov_2.819793_g1099_i0 PRJNA807347 1193 750 2.819793 21.1484475 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 1256 0   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g1099 i0 96.929 50.1866666666667 749 23 99 0 2 750 2293 1545 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 37640 1256 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
18657752 18657752 PRJNA807347_P_NODE_9975_length_268_cov_1.553846_g9872_i0 PRJNA807347 9975 268 1.553846 4.16430728 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 142 5.52e-40   NR OMJ67736.1 5963 g9872 i0 71.6 3.95149253731343 88 25 98.5 0 268 5 143 230 OMJ67736.1 hypothetical protein SteCoe_35015 [Stentor coeruleus] diamond 1059 142 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
22483194 22483194 PRJNA807347_P_NODE_2778_length_504_cov_1.287703_g2675_i0 PRJNA807347 2778 504 1.287703 6.49002312 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 116 1.14e-26   NR XP_001427897.1 5888 g2675 i0 40.1 2.88690476190476 162 93 94.6 2 477 1 1997 2157 XP_001427897.1 uncharacterized protein GSPATT00005249001 [Paramecium tetraurelia] diamond 1455 116 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
26936411 26936411 PRJNA807347_P_NODE_8642_length_282_cov_1.861244_g8539_i0 PRJNA807347 8642 282 1.861244 5.24870808 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 85.1 1.81e-18   NR XP_004037566.1 5932 g8539 i0 46.8 3.75531914893617 94 49 98.9 1 282 4 6 99 XP_004037566.1 transcription factor btf3, putative [Ichthyophthirius multifiliis] diamond 1059 85.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
27915728 27915728 PRJNA807347_P_NODE_3865_length_423_cov_1.514286_g3762_i0 PRJNA807347 3865 423 1.514286 6.40542978 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 142 2.7299999999999998e-40   NR XP_004027231.1 5932 g3762 i0 51.4 6.5177304964539 142 65 97.9 1 417 4 11 152 XP_004027231.1 hypothetical protein IMG5_187300 [Ichthyophthirius multifiliis] diamond 2757 142 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
28137061 28137061 PRJNA807347_P_NODE_8925_length_279_cov_1.475728_g8822_i0 PRJNA807347 8925 279 1.475728 4.11728112 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 82.8 4.34e-16   NR CAD8146100.1 43138 g8822 i0 48.1 1.6989247311828 79 41 84.9 0 2 238 414 492 CAD8146100.1 unnamed protein product [Paramecium pentaurelia] diamond 474 83.2 0.995192307692308 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium pentaurelia
29485453 29485453 PRJNA807347_P_NODE_12050_length_252_cov_0.871508_g11947_i0 PRJNA807347 12050 252 0.871508 2.19620016 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 114 3.03e-27   NR CAG9311497.1 1481888 g11947 i0 50.5 4.35714285714286 95 35 98.8 2 4 252 474 568 CAG9311497.1 unnamed protein product [Blepharisma stoltei] diamond 1098 114 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
29801332 29801332 PRJNA807347_P_NODE_16591_length_243_cov_0.911765_g16488_i0 PRJNA807347 16591 243 0.911765 2.21558895 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 55.5 1.22e-6   NR CAD8067693.1 65129 g16488 i0 40.6 0.851851851851852 69 41 85.2 0 242 36 750 818 CAD8067693.1 unnamed protein product [Paramecium sonneborni] diamond 207 55.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
31136993 31136993 PRJNA807347_P_NODE_7455_length_299_cov_1.367257_g7352_i0 PRJNA807347 7455 299 1.367257 4.08809843 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 76.3 3.79e-15   NR CAD8206115.1 43137 g7352 i0 50 4.90635451505017 80 39 79.3 1 299 63 29 108 CAD8206115.1 unnamed protein product [Paramecium octaurelia] diamond 1467 76.6 0.996083550913838 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
31674766 31674766 PRJNA807347_P_NODE_14617_length_246_cov_2.346821_g14514_i0 PRJNA807347 14617 246 2.346821 5.77317966 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 63.5 1.79e-9   NR TNV74080.1 5974 g14514 i0 42.3 6.30487804878049 78 44 93.9 1 8 238 202 279 TNV74080.1 hypothetical protein FGO68_gene9822 [Halteria grandinella] diamond 1551 63.5 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;