RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807347" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA807347 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27117162 27117162 PRJNA807347_P_NODE_9782_length_270_cov_1.553299_g9679_i0 PRJNA807347 9782 270 1.553299 4.1939073 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 125 2.4999999999999998e-33   NR MCF6286801.1 2030809 g9679 i0 67.8 1 90 29 100 0 1 270 125 214 MCF6286801.1 class I SAM-dependent methyltransferase [Candidatus Hydrogenedentota bacterium] diamond 270 125 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28484273 28484273 PRJNA807347_P_NODE_1726_length_636_cov_1.747780_g1625_i0 PRJNA807347 1726 636 1.74778 11.1158808 Pseudomonadati 3379134 Bacteria Bacteria 73.6 3.26e-11   NR HEO70988.1 2030809 g1625 i0 41.7 1.43396226415094 108 61 50.5 2 80 400 55 161 HEO70988.1 P-type conjugative transfer protein TrbL [Candidatus Hydrogenedentota bacterium] diamond 912 73.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;