RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807347" and tax_phylum = "Candidatus Glassiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Glassiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA807347 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28443942 28443942 PRJNA807347_P_NODE_9946_length_268_cov_2.051282_g9843_i0 PRJNA807347 9946 268 2.051282 5.49743576 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 88.6 1.56e-19   NR MBW7998567.1 2602803 g9843 i0 50.6 0.951492537313433 85 42 95.1 0 6 260 8 92 MBW7998567.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 255 88.6 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
29233262 29233262 PRJNA807347_P_NODE_13109_length_250_cov_0.870056_g13006_i0 PRJNA807347 13109 250 0.870056 2.17514 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 62 1.39e-10   NR HUU89521.1 2602803 g13006 i0 54.4 0.684 57 26 68.4 0 1 171 5 61 HUU89521.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 171 62 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;