contig_metadata
9 rows where bioproject = "PRJNA807347", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7184524 | 7184524 | PRJNA807347_P_NODE_11326_length_255_cov_2.554945_g11223_i0 | PRJNA807347 | 11326 | 255 | 2.554945 | 6.51510975 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 138 | 1.85e-36 | NR | MCD9186675.1 | 2283092 | g11223 | i0 | 81.2 | 1 | 85 | 16 | 100 | 0 | 1 | 255 | 153 | 237 | MCD9186675.1 sugar transferase [Pyrinomonadaceae bacterium] | diamond | 255 | 138 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 7600606 | 7600606 | PRJNA807347_P_NODE_14626_length_246_cov_2.011561_g14523_i0 | PRJNA807347 | 14626 | 246 | 2.011561 | 4.94844006 | Bacteria | 2 | Bacteria | Bacteria | 438 | 1.4599999999999996e-118 | NTclustered | gi|31789464|gb|AY281356.1| | 171953 | g14523 | i0 | 98.78 | 104.49593495935 | 246 | 3 | 100 | 0 | 1 | 246 | 9904 | 10149 | Uncultured Acidobacteria bacterium clone 41b15 genomic sequence | blastn | 25706 | 438 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 27054235 | 27054235 | PRJNA807347_P_NODE_17502_length_235_cov_2.629630_g17399_i0 | PRJNA807347 | 17502 | 235 | 2.62963 | 6.1796305 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 60.1 | 4.21e-9 | NR | HYT49420.1 | 2283092 | g17399 | i0 | 48.1 | 3.9063829787234 | 77 | 39 | 98.3 | 1 | 233 | 3 | 5 | 80 | HYT49420.1 GatB/YqeY domain-containing protein [Pyrinomonadaceae bacterium] | diamond | 918 | 60.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 27821337 | 27821337 | PRJNA807347_P_NODE_14984_length_246_cov_0.895954_g14881_i0 | PRJNA807347 | 14984 | 246 | 0.895954 | 2.20404684 | Bacteria | 2 | Bacteria | Bacteria | 83.2 | 1.03e-16 | NR | MEA2173600.1 | 2052146 | g14881 | i0 | 49.4 | 1.96341463414634 | 81 | 41 | 98.8 | 0 | 2 | 244 | 23 | 103 | MEA2173600.1 hypothetical protein [Blastocatellia bacterium] | diamond | 483 | 84 | 0.990476190476191 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellia bacterium | |||||
| 27843701 | 27843701 | PRJNA807347_P_NODE_13064_length_250_cov_0.870056_g12961_i0 | PRJNA807347 | 13064 | 250 | 0.870056 | 2.17514 | Blastocatellia bacterium | 2052146 | Bacteria | Bacteria | 84.7 | 5.77e-17 | NR | MFP5260654.1 | 2052146 | g12961 | i0 | 83.3 | 1.188 | 48 | 8 | 57.6 | 0 | 250 | 107 | 394 | 441 | MFP5260654.1 PQQ-binding-like beta-propeller repeat protein [Blastocatellia bacterium] | diamond | 297 | 84.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellia bacterium | |||||
| 27843704 | 27843704 | PRJNA807347_P_NODE_17824_length_227_cov_2.103896_g17721_i0 | PRJNA807347 | 17824 | 227 | 2.103896 | 4.77584392 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 48.5 | 1.78e-4 | NR | MFN6965291.1 | 2283092 | g17721 | i0 | 92 | 0.330396475770925 | 25 | 2 | 33 | 0 | 150 | 224 | 1 | 25 | MFN6965291.1 hypothetical protein [Pyrinomonadaceae bacterium] | diamond | 75 | 48.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 29075436 | 29075436 | PRJNA807347_P_NODE_17688_length_230_cov_2.184713_g17585_i0 | PRJNA807347 | 17688 | 230 | 2.184713 | 5.0248399 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 72 | 6.72e-14 | NR | HET7695078.1 | 2910147 | g17585 | i0 | 53.8 | 0.847826086956522 | 65 | 29 | 84.8 | 1 | 195 | 1 | 57 | 120 | HET7695078.1 hypothetical protein [Vicinamibacterales bacterium] | diamond | 195 | 72 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 30433673 | 30433673 | PRJNA807347_P_NODE_16893_length_242_cov_0.923077_g16790_i0 | PRJNA807347 | 16893 | 242 | 0.923077 | 2.23384634 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 155 | 2.51e-42 | NR | MET0164598.1 | 2910147 | g16790 | i0 | 90 | 0.991735537190083 | 80 | 8 | 99.2 | 0 | 3 | 242 | 170 | 249 | MET0164598.1 hypothetical protein [Vicinamibacterales bacterium] | diamond | 240 | 155 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 31665917 | 31665917 | PRJNA807347_P_NODE_13277_length_249_cov_0.886364_g13174_i0 | PRJNA807347 | 13277 | 249 | 0.886364 | 2.20704636 | Terriglobia bacterium | 2081523 | Bacteria | Bacteria | 81.6 | 7.73e-16 | NR | MBZ5673295.1 | 2081523 | g13174 | i0 | 49.4 | 1 | 83 | 41 | 98.8 | 1 | 3 | 248 | 62 | 144 | MBZ5673295.1 hypothetical protein [Terriglobia bacterium] | diamond | 249 | 81.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;