RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA807347", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA807347 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28570017 28570017 PRJNA807347_P_NODE_13627_length_248_cov_3.177143_g13524_i0 PRJNA807347 13627 248 3.177143 7.87931464 Synergistales bacterium 2268201 Bacteria Bacteria 53.1 3.52e-7   NR GHV45307.1 2268201 g13524 i0 63 0.326612903225806 27 10 32.7 0 156 76 33 59 GHV45307.1 hypothetical protein FACS1894204_04090 [Synergistales bacterium] diamond 81 53.1 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
31318069 31318069 PRJNA807347_P_NODE_13295_length_249_cov_0.886364_g13192_i0 PRJNA807347 13295 249 0.886364 2.20704636 Jonquetella 428711 Bacteria Bacteria 158 1.24e-46   NR WP_008520418.1 428711 g13192 i0 100 0.987951807228916 82 0 98.8 0 2 247 91 172 WP_008520418.1 MULTISPECIES: ribonuclease III family protein [Jonquetella] diamond 246 158 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Jonquetella  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;