contig_metadata
5 rows where bioproject = "PRJNA807347", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26673984 | 26673984 | PRJNA807347_P_NODE_7181_length_305_cov_3.189655_g7078_i0 | PRJNA807347 | 7181 | 305 | 3.189655 | 9.72844775 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 72.8 | 1.26e-13 | NR | WP_323470850.1 | 197 | g7078 | i0 | 40 | 0.836065573770492 | 85 | 51 | 83.6 | 0 | 263 | 9 | 1 | 85 | WP_323470850.1 hypothetical protein, partial [Campylobacter jejuni] | diamond | 255 | 72.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 29012430 | 29012430 | PRJNA807347_P_NODE_5068_length_366_cov_1.375427_g4965_i0 | PRJNA807347 | 5068 | 366 | 1.375427 | 5.03406282 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 67.8 | 2.15e-11 | NR | WP_323470850.1 | 197 | g4965 | i0 | 39 | 0.672131147540984 | 82 | 50 | 67.2 | 0 | 116 | 361 | 13 | 94 | WP_323470850.1 hypothetical protein, partial [Campylobacter jejuni] | diamond | 246 | 67.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 30243875 | 30243875 | PRJNA807347_P_NODE_13472_length_249_cov_0.880682_g13369_i0 | PRJNA807347 | 13472 | 249 | 0.880682 | 2.19289818 | Campylobacter rectus RM3267 | 553218 | Bacteria | Bacteria | 68.2 | 3.22e-12 | NR | EEF15372.1 | 553218 | g13369 | i0 | 86.5 | 1.26506024096386 | 37 | 5 | 44.6 | 0 | 138 | 248 | 55 | 91 | EEF15372.1 NifU-like protein [Campylobacter rectus RM3267] | diamond | 315 | 68.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 30654361 | 30654361 | PRJNA807347_P_NODE_16053_length_244_cov_0.906433_g15950_i0 | PRJNA807347 | 16053 | 244 | 0.906433 | 2.21169652 | Helicobacter pylori | 210 | Bacteria | Bacteria | 57.4 | 7.61e-9 | NR | GAA8908440.1 | 210 | g15950 | i0 | 73 | 0.454918032786885 | 37 | 9 | 45.5 | 1 | 232 | 122 | 13 | 48 | GAA8908440.1 hypothetical protein Kyoto166A_1440 [Helicobacter pylori] | diamond | 111 | 57.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32117932 | 32117932 | PRJNA807347_P_NODE_3778_length_428_cov_1.222535_g3675_i0 | PRJNA807347 | 3778 | 428 | 1.222535 | 5.2324498 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 50.1 | 4.18e-5 | NR | GAA6775601.1 | 210 | g3675 | i0 | 95.2 | 0.483644859813084 | 21 | 1 | 14.7 | 0 | 428 | 366 | 31 | 51 | GAA6775601.1 hypothetical protein Kyoto199A_4750 [Helicobacter pylori] | diamond | 207 | 50.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;