RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA807347", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA807347 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27063028 27063028 PRJNA807347_P_NODE_6722_length_316_cov_1.271605_g6619_i0 PRJNA807347 6722 316 1.271605 4.0182718 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 79 4.53e-15   NR CAF0856406.1 104777 g6619 i0 39 4.98417721518987 105 64 99.7 0 1 315 114 218 CAF0856406.1 unnamed protein product [Brachionus calyciflorus] diamond 1575 79.7 0.991217063989962 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
28380601 28380601 PRJNA807347_P_NODE_15526_length_245_cov_0.901163_g15423_i0 PRJNA807347 15526 245 0.901163 2.20784935 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 133 3.31e-36   NR CAF1267400.1 2762511 g15423 i0 72.8 1.98367346938776 81 22 99.2 0 1 243 121 201 CAF1267400.1 unnamed protein product [Rotaria sp. Silwood1] diamond 486 133 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
31508054 31508054 PRJNA807347_P_NODE_16016_length_244_cov_0.906433_g15913_i0 PRJNA807347 16016 244 0.906433 2.21169652 Brachionus plicatilis 10195 Rotifera other_Eukaryota 58.9 7.26e-8   NR RNA20918.1 10195 g15913 i0 62.5 0.491803278688525 40 15 49.2 0 155 36 549 588 RNA20918.1 calpain-5, partial [Brachionus plicatilis] diamond 120 58.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;